Gene Lreu_1901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1901 
Symbol 
ID5189800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1959771 
End bp1960772 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content39% 
IMG OID640591744 
Producthypothetical protein 
Protein accessionYP_001272475 
Protein GI148545105 
COG category[S] Function unknown 
COG ID[COG4086] Predicted secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCTCAA ATAAGTTAAC CAAAATCATT ATTACTTCGA CTCTTGCACT ATCTTTATTA 
GCAGTGCCAG TTAGCCAGGC CACGGTTTTG GCGGCTGAAA CAACTAGTGA AAGTACGAGT
AGCAGTTCAA CTACCCAGAC TCATACGTTA AATAAATCAT ATGTTGTATA TGGAGCAGGG
GCTGCCGAGA AGAATGAATT AAATAATGTA CTAGCAGTCG ATGATAACTT TACAACGTTA
ACCGCTACTG CCAGTGATTA TCAGAAGTAT ATTAATCCGA ATGGTTCGAC AACTAATGCT
GCCATGGTTA GTTCGGTAGC AATTGTCCCC ACCGATCCAG GTTCGGGGAT TAAAGTTAAT
GTAAAAAAGT TTAATGGTGA GGATAATATT ACGAAAGTTA CTGCCCAACA GTACGCTATG
GTTGCGCAAA TGGCGGGGGT TACGGATGTT ACTATTACCG TTAGCGCTAA CCGAGCTGTT
TCTGGAGAGT CAGCTTTAAC CGGAGTCTAT AAAGCAATTG CGGCAGATGG AGTTAGTTTA
AATGAGCAAA ATACACAATC TGCTAACCAA ATGTTGACCG CAACAAATGG GGCAATTGAA
GCTAATAAGG ATGATAGTAA ATATCCGGGT AAGTTGATGG CTGCGGTTGG TGATACCACT
AAAGAAATTA ACCAACAAAA GAAACAAGGA ACTACCCCAA CGCAAAATCA AATTCAAGTA
ATCTTTAATC AGAAACTTGA AGAGCGAAAC ATTTACAATG AAACAAAGAA TCATGAACAA
CCAATTATCA ATGCGCTTGT TCAGTTTAAT AATGCTCCAA TTAGTTCAAG TAAAGACTAT
AGCTCGCACG TAACTGATAC GATTAATAAT GTAAAGAATT CATCAGGAGA TATGATGAAT
AAGGCGAAAA AATTCTTGAA TTCTCAAGAC GGGCAGGCAG TTAAGCAACA AGCTCAGTCT
TGGTGGACCC AGTTTGTTAA CTGGATCCGT AGCTGGTTTT AA
 
Protein sequence
MRSNKLTKII ITSTLALSLL AVPVSQATVL AAETTSESTS SSSTTQTHTL NKSYVVYGAG 
AAEKNELNNV LAVDDNFTTL TATASDYQKY INPNGSTTNA AMVSSVAIVP TDPGSGIKVN
VKKFNGEDNI TKVTAQQYAM VAQMAGVTDV TITVSANRAV SGESALTGVY KAIAADGVSL
NEQNTQSANQ MLTATNGAIE ANKDDSKYPG KLMAAVGDTT KEINQQKKQG TTPTQNQIQV
IFNQKLEERN IYNETKNHEQ PIINALVQFN NAPISSSKDY SSHVTDTINN VKNSSGDMMN
KAKKFLNSQD GQAVKQQAQS WWTQFVNWIR SWF