Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1897 |
Symbol | |
ID | 5189050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 1956093 |
End bp | 1956671 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640591740 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001272471 |
Protein GI | 148545101 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 72 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAAT CTAAAACTGA GAAAAAAATT CAAGATGCCT TACTATTACT TTTAAAAACG GAAAGTATTA ACCACATCAC CATGAGCCAG ATTGCTCAAA AAGCTAATCT TAATCGTGTC ACTCTCTATC GACACTACAA CGATAAATGG GATATTTTAG AGAATATAGA ACAAGAATTT CTTCATAAGT TAGACACTCC GCATGCAAAA ATGATCACTA ATCTTCAGCT AACTACTCAG TCTTTACATC CTCATCCTAA TTTAAGAGCA CTAACAAGCT TCTTTAAGGT CTTTCAAGAT AATTTTCCTC TTTTGCAAGT TCTTATGGGT CCAAATGCCA ACTTAGGCTT TACTAATAAA TTAATGACTT ATTTAATCAA CTTAGAAGAA AAATCACATC CTTACATCCC GGTTAGTATC CAGAAATTGA ATCCAGATAT GTTTTCTTAC TATAGTATTT CCTCTTTGAT CGGAATAATT CAGTTTTGGC GAAAAAATCA AAATTACTCA CCATCACAAA TGGCAGAATT TTTCTTTAAA ATTCGTATCG GTGCTATTAA AGAATTCCAA AACAAATGA
|
Protein sequence | MKKSKTEKKI QDALLLLLKT ESINHITMSQ IAQKANLNRV TLYRHYNDKW DILENIEQEF LHKLDTPHAK MITNLQLTTQ SLHPHPNLRA LTSFFKVFQD NFPLLQVLMG PNANLGFTNK LMTYLINLEE KSHPYIPVSI QKLNPDMFSY YSISSLIGII QFWRKNQNYS PSQMAEFFFK IRIGAIKEFQ NK
|
| |