| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1888 |
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| Symbol | |
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| ID | 5190123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | - |
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| Start bp | 1948158 |
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| End bp | 1949267 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640591731 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001272462 |
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| Protein GI | 148545092 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTATCA GTCAAATTTA TTTTGAACGG TATTGGGTTT CGTATAAGAA TTCACGGTTA
ACTAGTTGGG GGCTAGGAGC CGTTATTATA ATAACTTACT TTATTCAGGA ATTTTGCCTG
TTTCAGTTGT CCTTATTTAA TATCGGACAA GTCGTTTTCA TGCAAGTTGT TTCTGTTACA
ATGCTTTTTC GCGATAAAGT GTACAAAATA TGGTGGGCAT TATTAGCTCT AACTCCGTTA
TTTGTGAATG TCGTGGAATA TTTGATGGGG ATTTTACCAC TAAAAGATTG GTGGTATTGG
ATCGTTGAAT CGATTGTTTT TACAACAATT TGCTTGGCTT TAACGCGGTG GTGTAAAATT
TCAAAAAGAA TTAGTTATTT TTATGCCATT GCATCGTTGG GAATAGTCGA GTTAGTATCG
CTTGCGATTA CTCGCAGTTT TTCTCCTGTA AGTATTGCTG CAGCCACACT AGGATTATTT
GTTATTGCGA TGTTTGAAGA TCAGCGTTTT TATAGTGAAA AGAAAAATGA GCAAAAAATA
AAGCTTCTTG AAAAAGAAAG TGAACGTGAT GATTTAACAG GGTTACTTAA TTACCGAGCT
CTTAGTCAAG AAATTAATCG ATTAGCTAAT AATAATGAAA TCCATAATAT CGTAATCGGG
GCATTAGATA TTGATCACTT TAAGAAGATA AATGATACAT ACGGTCACTT TGTTGGTAAT
GAAGTGTTAA ATTATTTCTC AACAGTTTTT CGCGAACAAA TTCATTCCGC ATTTCCCAAG
CATGGTTATG TATATCGCTT CGGGGGTGAG GAATTCACTA TTGTAGTTTC TAACCATTCA
CTAGAAGAAG TCTATCAATT ACTCCAGTCG ATTGAAAAAT TCTTTAATAA TAAATCGATT
GTTACCAAGG AAGGAATGAA ATTAACAATT AGCTTTTCAT GCAGTTTAAC TGATCGTTTG
AATGATGAAT TACTTGACAC GACCTTGAAG CGAGCTGATA AAATGTTATA TAGTGTAAAG
AACAATGGCC GTGGATGGAT TGTTACTGAT CAGCATCATC AACGTCCCCA AAAGCCTAGT
TTAGAACGTA AAATAAATAA CAATTATTAA
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| Protein sequence | MIISQIYFER YWVSYKNSRL TSWGLGAVII ITYFIQEFCL FQLSLFNIGQ VVFMQVVSVT
MLFRDKVYKI WWALLALTPL FVNVVEYLMG ILPLKDWWYW IVESIVFTTI CLALTRWCKI
SKRISYFYAI ASLGIVELVS LAITRSFSPV SIAAATLGLF VIAMFEDQRF YSEKKNEQKI
KLLEKESERD DLTGLLNYRA LSQEINRLAN NNEIHNIVIG ALDIDHFKKI NDTYGHFVGN
EVLNYFSTVF REQIHSAFPK HGYVYRFGGE EFTIVVSNHS LEEVYQLLQS IEKFFNNKSI
VTKEGMKLTI SFSCSLTDRL NDELLDTTLK RADKMLYSVK NNGRGWIVTD QHHQRPQKPS
LERKINNNY
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