Gene Lreu_1884 details

Gene Information

• Locus tag: Lreu_1884
• ID: 5189475
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Lactobacillus reuteri DSM 20016
• Kingdom: Bacteria
• Replicon accession: NC_009513
• Strand: +
• Start bp: 1944001
• End bp: 1944561
• Gene Length: 561 bp
• Protein Length: 186 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 640591727
• Product: hypothetical protein
• Protein accession: YP_001272458
• Protein GI: 148545088

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.00603911
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTACGT TATCATTTGC CGGACCGCGT TTTACTACAA AGAATTTAAC TTTAGCTGCT 
ATGCTGATCG CACTGCAGGT AATCTTAAAC AAACTTTCAA TTGGAGATCC AGCGGTTTTA 
AAATTTAGTT TTGGTTTTAT TGCCACCGCA CTTATTGGCT ACTGTCTTGG ACCATGGATT 
GGTGGCTGGT CAATGGTCGT ATCTGATATC ATAAGTAATA CTATTTTAAA TTCAGGAAGC 
TTATTCTTTC CTGGCTTTAC CCTCTCAGCA TTTATCGCTG GTGTAATTGC AGGAATGTTC 
CTATACCAAC AACGGATAAG CTGGCAACGA ATTTTAATAT ATGAGTTTTT CCAAATTCTT 
CTTACTAATG TTATCGGCAC AACTTTATGG CTTTACCTTA TGAGCTTAAG TTCCAGTAGT 
ACCGGCCATA CTTTCATGGC TCTTCTCTTC ATTCGTTTGC CAAAAGAGTT GATTACCTGG 
CCGATTGAAA CCTTGCTTGT ACTAGTTATC CTGCGGCAAT TATCACGATT AAATTTAATT 
ACAAAAAAGA ATGAAAAATA A 

 

Protein sequence

MSTLSFAGPR FTTKNLTLAA MLIALQVILN KLSIGDPAVL KFSFGFIATA LIGYCLGPWI 
GGWSMVVSDI ISNTILNSGS LFFPGFTLSA FIAGVIAGMF LYQQRISWQR ILIYEFFQIL 
LTNVIGTTLW LYLMSLSSSS TGHTFMALLF IRLPKELITW PIETLLVLVI LRQLSRLNLI 
TKKNEK