Gene Lreu_1882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1882 
Symbol 
ID5189452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand+ 
Start bp1940460 
End bp1941101 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content40% 
IMG OID640591725 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_001272456 
Protein GI148545086 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAG TATTTGTTGT CGGCGGTTCA GGCCGTGTCG CTACTGACTT AATTAAAGAT 
TTAGTTGCTA CTGGTAATGA AGTTACAGCT GGTGCTCGCC ATCCAGAAAA AGTTATTAAG 
TTAAACCACG TTACTGCTGT AGAATTGAAC CTACATGATA GCGTTGAAAA AATCGCTGAA 
TTAATGAAAG ACATGGATGC AGTTTACTTT GTTGCCGGAT CACGTGGCAA AGATTTACTG 
CAAACTGATG CGATGGGGGC AGTTAAAACA ATGCAAGCTA CCGAAAAAGA CGGTATTAAA 
CGTTACATTA TGTTAAGTTC GCTCTATGCC TTACAACCTG AAATGTGGCC AAAAGTTCCA 
TCATTAGCTT CAATTATGGA CTACAATATT GCCAAGTTCT TCGCTGATAA TTATCTTATT 
TCAAATACGA ACCTTGACTA CACTATCCTT CAACCCGCTA ACTTAACTGA AGAACCTGGT 
ACCGGTAAAA TTCAAATTGG TGAAGGCTCT GCAACCTCTA ATCCGATTCC AGATGTTGCC 
CAGACTTTAG CCGATATCTT ACAACACGAT AATACAATCG GTCATGTTAT CATGATGCGG 
AGTGGCGATA CGCCGATTGA AGAAGCACTG GATCAAATTT AA
 
Protein sequence
MKKVFVVGGS GRVATDLIKD LVATGNEVTA GARHPEKVIK LNHVTAVELN LHDSVEKIAE 
LMKDMDAVYF VAGSRGKDLL QTDAMGAVKT MQATEKDGIK RYIMLSSLYA LQPEMWPKVP 
SLASIMDYNI AKFFADNYLI SNTNLDYTIL QPANLTEEPG TGKIQIGEGS ATSNPIPDVA 
QTLADILQHD NTIGHVIMMR SGDTPIEEAL DQI