Gene Lreu_1878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1878 
Symbol 
ID5189520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1935835 
End bp1936287 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content42% 
IMG OID640591721 
ProductHxlR family transcriptional regulator 
Protein accessionYP_001272452 
Protein GI148545082 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACGGC AACCTAAAAT GTATAATACT GGAGCAGACT ACGCTCTAGC AATCATCGGT 
GGTAAATGGA AGTCTGTCAT CCTCTATCTC TTAGCTGGTC ATCCCCGACG GACAAGTGAA
CTAGTTAAGC AACTAGGCAC CTCATATAAA GTCTTGAGTG ACCAGCTTCG TGAAATGACA
GATGCCGGCC TCGTTATCCG TAAAAGTTTC AATACAATTC CTCCGCACGT TGAATATCGC
TTAACTCCTG AGGGTGAGAA CCTTTATGCC GCCCTTCGTT ATTTAAATTA CTGGGGCGAA
AACAGAGCAA AACAAACTGG TGACATTAAA ATCATGTGTA CTGACGAAAT GAAGCAGGTC
GGCGATGATG GTTTGTGTGT CATCACTAAA AAACATCTTA ATCATTGGCG CCAAGAAATT
GTAAAAAGCA AGGACAAAGA CATTTCTATC TAA
 
Protein sequence
MERQPKMYNT GADYALAIIG GKWKSVILYL LAGHPRRTSE LVKQLGTSYK VLSDQLREMT 
DAGLVIRKSF NTIPPHVEYR LTPEGENLYA ALRYLNYWGE NRAKQTGDIK IMCTDEMKQV
GDDGLCVITK KHLNHWRQEI VKSKDKDISI