Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1878 |
Symbol | |
ID | 5189520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 1935835 |
End bp | 1936287 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640591721 |
Product | HxlR family transcriptional regulator |
Protein accession | YP_001272452 |
Protein GI | 148545082 |
COG category | [K] Transcription |
COG ID | [COG1733] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 64 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACGGC AACCTAAAAT GTATAATACT GGAGCAGACT ACGCTCTAGC AATCATCGGT GGTAAATGGA AGTCTGTCAT CCTCTATCTC TTAGCTGGTC ATCCCCGACG GACAAGTGAA CTAGTTAAGC AACTAGGCAC CTCATATAAA GTCTTGAGTG ACCAGCTTCG TGAAATGACA GATGCCGGCC TCGTTATCCG TAAAAGTTTC AATACAATTC CTCCGCACGT TGAATATCGC TTAACTCCTG AGGGTGAGAA CCTTTATGCC GCCCTTCGTT ATTTAAATTA CTGGGGCGAA AACAGAGCAA AACAAACTGG TGACATTAAA ATCATGTGTA CTGACGAAAT GAAGCAGGTC GGCGATGATG GTTTGTGTGT CATCACTAAA AAACATCTTA ATCATTGGCG CCAAGAAATT GTAAAAAGCA AGGACAAAGA CATTTCTATC TAA
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Protein sequence | MERQPKMYNT GADYALAIIG GKWKSVILYL LAGHPRRTSE LVKQLGTSYK VLSDQLREMT DAGLVIRKSF NTIPPHVEYR LTPEGENLYA ALRYLNYWGE NRAKQTGDIK IMCTDEMKQV GDDGLCVITK KHLNHWRQEI VKSKDKDISI
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