Gene Lreu_1866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1866 
Symbol 
ID5189650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1927242 
End bp1928618 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content40% 
IMG OID640591709 
Productamino acid permease-associated region 
Protein accessionYP_001272440 
Protein GI148545070 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAATC AGTTACCCAA GGGAAAAGAG CATGAGAAAA CTCTCGGCCT CTTCGACCTT 
TCTATTCTAG GTATTGGCGC AATCATCGGA ACTGGAATTT TAGTTTTAAC TGGAATTGTC
GCCGCGGAAG ATTCAGGCCC CGCAATTGTT TTCTCTTTTC TGATTGCTGC TCTTGCTAGT
GGTTTAATTG GTCTCTGTTA TTCAGAATTA ACCACTAGTT TACCCAATTC AGGAAGTGCC
TTTTACTACG CGTGGGTTTC AATTGGTAAA TTTATGGCGT TCCTTGCTGG ATGGACGCTG
ATTGGGGTCT ACGTTACTAC AACCGCTACA GTAGCCAATG GGTGGACTGG GTACGTACAA
TCGTTCCTAG AAGTCCTCGG AGTTAATTTA CCGCATAAAT TACTGGTTAC GCCTGCAGCT
GGTGGTTATG TAAACCTCCC CGCTGTCTTG ATGATCCTTT TTATGACGAT TATTCTGACA
CGTGGAACCA GTGAAAGTAA ACTTGTTAAC AACTTCTTGG TTGGTGTCAA AATCTTTATT
ATTGTTCTAT TTATCGTTGT TAGTGCTCAA CATATCAATC CAGCTAACTG GCACCCCTTT
TTACCATATG GATACAAAGG GATTTTCACA GGAGCATCTG CTGTCTTCTT CTCCTTCCTT
GGATTTGATG CATTAGCTAC TTCTGCTGAA GATGCTAAAG ATGTTGATAA AAATATTCCC
CGGGCAATAA TTTTATGTTT AGTCATTTCA ACGGCCCTCT ATATTTTAGT TAGTCTTGTT
ATGACGGGAG TTCTAAGCTA TAAAGATTTG AATGTCTCTG AAGCTATGTC ATATGTTCTT
TTAGCTAAAG GTCATAAATA CGTGGCTGAG ATTGTTTCAC TTGGTGCTGT TTTAGGAATT
ATGGCTGTCG TCTTTGCATT CATCTATGCT GGCTCAAATA TCATGAAGTC AATGAGTCGA
AGTGCCTTTC TTCCTCAAGG CCTCGCTAAA GTTAATGACA AAACTCAAAG TCCTAATCGT
GCTATTTGGT TAGTCGGACT TCTTGCAGCT GTCTTAGCCG GAGAATTCGA TCTCCATTAT
CTTGCATTAA TCGCCAACAT TGGATCATTG GTTGTCTTTG CTTTGATTTC GCTTATCGTA
ATTATCTTAC GGTACCGTTA TCCAGAATTA AAACGACCAT TTAAGGTACC TTTTGGCAAC
GTTATTCCTG TTCTATCAGT ATTGATCTGT ATTGTTTTAT TAGTAAGCAT CTCACTCAAT
GCTTGGTTAA CATACTTATT ATGGCTGGTA GTTGGATTAG GCGTTTACTT CTTCTATTCC
CTTCGTCATG CCAACGAATT TAACTTCCAA GACGAAAGTG ATATCCCAGG CAATTAA
 
Protein sequence
MQNQLPKGKE HEKTLGLFDL SILGIGAIIG TGILVLTGIV AAEDSGPAIV FSFLIAALAS 
GLIGLCYSEL TTSLPNSGSA FYYAWVSIGK FMAFLAGWTL IGVYVTTTAT VANGWTGYVQ
SFLEVLGVNL PHKLLVTPAA GGYVNLPAVL MILFMTIILT RGTSESKLVN NFLVGVKIFI
IVLFIVVSAQ HINPANWHPF LPYGYKGIFT GASAVFFSFL GFDALATSAE DAKDVDKNIP
RAIILCLVIS TALYILVSLV MTGVLSYKDL NVSEAMSYVL LAKGHKYVAE IVSLGAVLGI
MAVVFAFIYA GSNIMKSMSR SAFLPQGLAK VNDKTQSPNR AIWLVGLLAA VLAGEFDLHY
LALIANIGSL VVFALISLIV IILRYRYPEL KRPFKVPFGN VIPVLSVLIC IVLLVSISLN
AWLTYLLWLV VGLGVYFFYS LRHANEFNFQ DESDIPGN