Gene Lreu_1863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1863 
Symbol 
ID5189665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1922075 
End bp1923880 
Gene Length1806 bp 
Protein Length601 aa 
Translation table11 
GC content41% 
IMG OID640591707 
Productthreonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase 
Protein accessionYP_001272438 
Protein GI148545068 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0441] Threonyl-tRNA synthetase 
TIGRFAM ID[TIGR00418] threonyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCAGG TTGCTGTTAT GTCCCCAGAC GGATCAGTTA AGAAGATCGA TCGGGATTCA 
CAAGAAGGTT TAGAAGCATT ACGTAAGCTT TCTGCATTAA TGTTAAAGGC TGCATTAAAA
CAAGAATTTA AGGGTATTCG ACTTGGTGAA GCTGTCGCTG ACGAAGATGG TTTCCACGTT
GATTCTGATA AAGATAATCA ACAAGTTTCT GCTGACGAAT TACCAGCTCT TGAAGATGTA
ATCAAGGGAA TGGCAAAGAA CGATGTTAAG GTAGAATTTG TTGAAGTACC TGTAGAGGAA
GCACTTGCCG AAGTAAAAGA TGATCGTTTC TCAACTGAAT TGATCAATGA AAATGCTAAA
GACGGCAAAG TAGCAATGTA CCAACTTGGT GATGTCAAAG CTGTTGCAGA TGATGACATT
CTTTTATATG GTAACGTTGT TAAAAACTTA CGCCTTCTTT CTGTTGCTGG TGCTTACTGG
AAAGGTATGT CTTCAAATCC AATGCTTCAA CGGATTTACG GAACTGTCTT CTACAAGAAG
GACGCATTAG AAGAAGACTT AAAGAAACGT CAAGAAGCTA AGGAACGTGA CCACCGTGTT
ATCGGTAACC AACTTGACCT CTTCTTTGTT GATCCTAAAG TTGGTGCCGG TTTACCATAC
TGGTTACCAA AAGGTGCTAC TATTCGCCGG ACCATCGAAC GTTACATTAT TGACCGGGAA
GTTGCCGATG GTTACCAACA CGTTTATACT CCAGTCCTAA TGAATCTTGA TGCCTACAAG
ACTTCTGGTC ACTGGGAACA CTACCGCGAC GATATGTTCC CACCAATGGA CATGGGTGAT
GGCGAAATGC TTGAATTACG GCCAATGAAC TGCCCAAGTC ATATTCAAGT TTACAAGCAC
CATATTCGTT CATACCGTGA TCTTCCATTA CGGATTGCTG AACTTGGTAT GATGCACCGT
TATGAAAAAT CAGGTGCTCT TTCTGGTCTT CAACGGGTTC GTGAAATGAC TTTGAACGAT
GGTCACACCT TCGTTACCCT TGACCAAATT CGTTCTGAAT TCGCTAAGAT TTTGAAGTTG
ATCATGAGCG TTTACGAAGA CTTTGATATT ACTGATTACA GCTTCCGTCT TTCTCTTCGT
GACCCTAAGA ACGTTAAGAA GTACTACGCT AATGACGAAA TGTGGGAAAA ATCCCAATCA
ATGTTGAAAT CAGCAATGGA CGATCTTAAC CTTGATTATT ATGAAGCTGA AGGTGAAGCT
GCCTTCTATG GTCCAAAACT TGATATTCAA ACTAAGACTG CTCTTGGAAA TGACGAAACA
ATGTCAACGA TTCAACTTGA CTTTATGCTT CCAGAACGAT TCGGACTTTC CTACGTTGGT
CAAGACGGTA AAGAACATCA ACCAGTTATG ATTCACCGTG GTGTTGTTGG AACAATGGAA
CGGTTCATGG CTTACTTAAC AGAAATTTAC AAGGGTGCAT TCCCAACTTG GCTAGCCCCA
GAACAAGTTC ACATTATCCC TGTTAACGAA GAAGCCCATG GTGAATACGC AGATGACCTC
GCTAAGAAGA TGAAGGCTGC TAATATCCGT GTTAATGTCG ATCACCGAAA CGAAAAGATG
GGCTACAAGA TTCGTGAAGC TCAAACACAA AAGGTTCCAT ACACTCTTGT TGTTGGAGAC
GACGAAAAGA ATAACAATGG TGTATCTGTT CGTAAGTACG GTGAAAAAGA ACAAAACGAA
ATGAGTCAAG AAGCATTTAT GAATGAAATT CTTGAAGATA TTGCTTCTTA CTCCCGCGAA
AAGTAA
 
Protein sequence
MAQVAVMSPD GSVKKIDRDS QEGLEALRKL SALMLKAALK QEFKGIRLGE AVADEDGFHV 
DSDKDNQQVS ADELPALEDV IKGMAKNDVK VEFVEVPVEE ALAEVKDDRF STELINENAK
DGKVAMYQLG DVKAVADDDI LLYGNVVKNL RLLSVAGAYW KGMSSNPMLQ RIYGTVFYKK
DALEEDLKKR QEAKERDHRV IGNQLDLFFV DPKVGAGLPY WLPKGATIRR TIERYIIDRE
VADGYQHVYT PVLMNLDAYK TSGHWEHYRD DMFPPMDMGD GEMLELRPMN CPSHIQVYKH
HIRSYRDLPL RIAELGMMHR YEKSGALSGL QRVREMTLND GHTFVTLDQI RSEFAKILKL
IMSVYEDFDI TDYSFRLSLR DPKNVKKYYA NDEMWEKSQS MLKSAMDDLN LDYYEAEGEA
AFYGPKLDIQ TKTALGNDET MSTIQLDFML PERFGLSYVG QDGKEHQPVM IHRGVVGTME
RFMAYLTEIY KGAFPTWLAP EQVHIIPVNE EAHGEYADDL AKKMKAANIR VNVDHRNEKM
GYKIREAQTQ KVPYTLVVGD DEKNNNGVSV RKYGEKEQNE MSQEAFMNEI LEDIASYSRE
K