Gene Lreu_1853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1853 
Symbol 
ID5189952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1910366 
End bp1912072 
Gene Length1707 bp 
Protein Length568 aa 
Translation table11 
GC content41% 
IMG OID640591697 
Productmannosyl-glycoprotein endo-beta-N-acetylglucosamidase 
Protein accessionYP_001272428 
Protein GI148545058 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1705] Muramidase (flagellum-specific) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000056221 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCGTC AACCTAATAA TGATCCATCA ACCCATTTTA AGATGTATAA AAGCGGAAAA 
AAATGGGTCT TTGCTGGATT AACTGCTGTT ACCTTATTAA CTGCTAGCGG CGCTGTTGCT
CATGCCGATG ATGCTTCAGT TTCTTCTGCA GAACCTGCCG CTACAACTAC TGCCAATACA
CAAAATAATA CAAATAGTGT CGCTGATTCT TCTGCTGTCG CTCAAAGCAC AGCAAATAGC
GCCTCAACAG AAAATAGCGC TGCTTCTAAT GCTAGTCAAG CTGTCGCTAG CCAAGCCGCT
GCTACTTCAG CCTCAGCACA ATCTACTGAA GCTAAACAAG CTGCTCCTGC TACTCCAAAG
GCTGCTAGTG CCGCTGCTGC ACCGCAAGAG AACTCAACAA CAGATTTAAG CGCCCTCCAT
TTCAGTAATA ACGCTTCACA ACAAGCATTC ATCCAAAGTG TTGCTCCGGG TGCAATCCAA
GGATGGAATG AATACAAGGT TCTTCCTTCA ATTACAGTCG CCCAGGCTAT CGTTGAAAGT
GGTTGGGGCC GTTCAGCTTT ATCAACCCAG GCCCATAACT TATTTGGAAT TAAGGGTTCC
TATAATGGAA ATTCAGTTGT AATGCGTACA CGGGAAGTTT ATGGTGGCCG GAGCGTTTAC
GTTAACGCCA ATTTCCGGGC CTATGCTAAC AACTCCGAAT CAGTTACTGA TCATGGTCGC
TTTCTCAACG TAAATAGTCG TTACCGTAAC TTACTTGGCG ATACTAACTA TGCATCTGTT
GCAAATAAGC TTCGGCAAGA CGGCTATGCT ACCGATCCAA GCTATGCTAG TACCTTAATT
CGTTTTGTTC AGACATATAA CTTAAACCAG TTAGATGCCG TTGCCCTTTC TGGGAAAGTT
GTTACGAATA AGCAAACTGA AAGTGCTCAA ACTCCCGAAA CTAATGTAAC TGTCTCAAAC
ACTGGATACT ACACGGTTAA AGGCGGAGAC ACGTTATCAC GTATTGCCGG ACAGTTTAAT
ACAACTGTAA ATAAACTCGC CACCTTAAAT GATATCCACA ATGTTAACCG TATTTATGTT
GGTCAACGGC TCTTGGTTCG TCAACCTGCT GAACAACAAC ATCAACAAAC AACCCCTAAG
CGAACTGAAA ACAATACTAC CACTAATAGT AATACATACA CCGTTAAAAG TGGCGATACC
CTTTCAGGAA TTGCTGGTAA ATTTAACACT ACTTATACTC AATTAGCTCA GCTCAATCAT
ATTAGTAACC CTAATGTGAT TCATGTAGGG CAAGTATTAA CGCTTCATCA AACTACAGCT
CAAAATACTA CTAACCATCA AGAAAGCCAG CAAAATAAAC AAGTTACTAC TAGTGCTAAT
GGCACCTACA CCGTTAAGAG TGGTGATACC CTTTCACAAA TTGCTGCTCG TTTTAATACC
ACAACATCTG CATTAGCTTC AACTAATCAT ATTAGTAACC CTAATTTAAT TGAAGTTGGT
CAACAATTAC GGATTAACAA TAGTGCTAGT GCTCAAAAAA ACACTTCATG TCACTCCAAT
ACTAACAATG GAAATTACGT AGTCCAAAGT GGTGATTCAT TATCAAAGAT TGCCGCTTAT
CATGGCTTAA ACTGGCGATC AATCGCAGCT AAAAATAACA TTCAAAGTCC ATACACAATC
TTTGTTGGAC AACGTTTATC ACTTTAG
 
Protein sequence
MNRQPNNDPS THFKMYKSGK KWVFAGLTAV TLLTASGAVA HADDASVSSA EPAATTTANT 
QNNTNSVADS SAVAQSTANS ASTENSAASN ASQAVASQAA ATSASAQSTE AKQAAPATPK
AASAAAAPQE NSTTDLSALH FSNNASQQAF IQSVAPGAIQ GWNEYKVLPS ITVAQAIVES
GWGRSALSTQ AHNLFGIKGS YNGNSVVMRT REVYGGRSVY VNANFRAYAN NSESVTDHGR
FLNVNSRYRN LLGDTNYASV ANKLRQDGYA TDPSYASTLI RFVQTYNLNQ LDAVALSGKV
VTNKQTESAQ TPETNVTVSN TGYYTVKGGD TLSRIAGQFN TTVNKLATLN DIHNVNRIYV
GQRLLVRQPA EQQHQQTTPK RTENNTTTNS NTYTVKSGDT LSGIAGKFNT TYTQLAQLNH
ISNPNVIHVG QVLTLHQTTA QNTTNHQESQ QNKQVTTSAN GTYTVKSGDT LSQIAARFNT
TTSALASTNH ISNPNLIEVG QQLRINNSAS AQKNTSCHSN TNNGNYVVQS GDSLSKIAAY
HGLNWRSIAA KNNIQSPYTI FVGQRLSL