Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1813 |
Symbol | |
ID | 5189958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 1863798 |
End bp | 1864577 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640591658 |
Product | hypothetical protein |
Protein accession | YP_001272389 |
Protein GI | 148545019 |
COG category | [S] Function unknown |
COG ID | [COG4905] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.406185 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCCTATT CACTTCCTGA AATCATTGTC TTATTTTTTA CCTATTCATT TATTGGCTGG TTATGGGAAA CCTGTTACTG TTCAATTAAG GACCATCATT TTGCCTACCG GGGATTCTTA TTTGGCCCTT ATTGTCCAGT ATATGGATTT GCCGTTACGA CGATTTTGAT TACTACCTAT CCGTTCCAAA ATAATATTTT TCTGCTATTC GTAGTAGGGT TTATTGTGGC TTCGATCTTT GAGTATGTAG CGAGTTGGCT GCTCGAAAAA CTTTTTCATA TGAAGTTATG GGACTATTCG CATCTAAAAG GAAACATTCA AGGAAGAGTT GCTCCCCAAA TTTCATTTTT CTGGGGGATT GGCGTTGTAT TGCTGGTTAA GTTTGTTCAG CCATTTATTC AGCGGATTAT TAACTGGGAA GAATCATGGA CTCACGGGAT GCTTGCCCTA ATTATCGTCC TCGTGATGGG AACTGACACT ATCCTCAGCG TTATTAGTGT GGAAAAATTC CATATTACAA CTCAGCAATG GGATGAACGA GCAGCCGCGT ACAGAAAGAA ACTGCTGGAT CGACTTGAAA AAGCAGCTCC TAAGGATAAA TTGGCAATTA AAGATCGCCT TCAAGATTGG CAACGGCACT TTGCTCAATA TCTAAACAAA GAGGGAGCTG GCAAGCAACT AAGCTGGAAT CATCGCCGGC TAATCAAGAG CTTCCCTAAG ATGAAGATGA CTGATAGTAA ATACTTTAAT AACTATAAAA ATGATCTTAA AAGTAAATAA
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Protein sequence | MPYSLPEIIV LFFTYSFIGW LWETCYCSIK DHHFAYRGFL FGPYCPVYGF AVTTILITTY PFQNNIFLLF VVGFIVASIF EYVASWLLEK LFHMKLWDYS HLKGNIQGRV APQISFFWGI GVVLLVKFVQ PFIQRIINWE ESWTHGMLAL IIVLVMGTDT ILSVISVEKF HITTQQWDER AAAYRKKLLD RLEKAAPKDK LAIKDRLQDW QRHFAQYLNK EGAGKQLSWN HRRLIKSFPK MKMTDSKYFN NYKNDLKSK
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