Gene Lreu_1813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1813 
Symbol 
ID5189958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1863798 
End bp1864577 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content39% 
IMG OID640591658 
Producthypothetical protein 
Protein accessionYP_001272389 
Protein GI148545019 
COG category[S] Function unknown 
COG ID[COG4905] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.406185 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCCTATT CACTTCCTGA AATCATTGTC TTATTTTTTA CCTATTCATT TATTGGCTGG 
TTATGGGAAA CCTGTTACTG TTCAATTAAG GACCATCATT TTGCCTACCG GGGATTCTTA
TTTGGCCCTT ATTGTCCAGT ATATGGATTT GCCGTTACGA CGATTTTGAT TACTACCTAT
CCGTTCCAAA ATAATATTTT TCTGCTATTC GTAGTAGGGT TTATTGTGGC TTCGATCTTT
GAGTATGTAG CGAGTTGGCT GCTCGAAAAA CTTTTTCATA TGAAGTTATG GGACTATTCG
CATCTAAAAG GAAACATTCA AGGAAGAGTT GCTCCCCAAA TTTCATTTTT CTGGGGGATT
GGCGTTGTAT TGCTGGTTAA GTTTGTTCAG CCATTTATTC AGCGGATTAT TAACTGGGAA
GAATCATGGA CTCACGGGAT GCTTGCCCTA ATTATCGTCC TCGTGATGGG AACTGACACT
ATCCTCAGCG TTATTAGTGT GGAAAAATTC CATATTACAA CTCAGCAATG GGATGAACGA
GCAGCCGCGT ACAGAAAGAA ACTGCTGGAT CGACTTGAAA AAGCAGCTCC TAAGGATAAA
TTGGCAATTA AAGATCGCCT TCAAGATTGG CAACGGCACT TTGCTCAATA TCTAAACAAA
GAGGGAGCTG GCAAGCAACT AAGCTGGAAT CATCGCCGGC TAATCAAGAG CTTCCCTAAG
ATGAAGATGA CTGATAGTAA ATACTTTAAT AACTATAAAA ATGATCTTAA AAGTAAATAA
 
Protein sequence
MPYSLPEIIV LFFTYSFIGW LWETCYCSIK DHHFAYRGFL FGPYCPVYGF AVTTILITTY 
PFQNNIFLLF VVGFIVASIF EYVASWLLEK LFHMKLWDYS HLKGNIQGRV APQISFFWGI
GVVLLVKFVQ PFIQRIINWE ESWTHGMLAL IIVLVMGTDT ILSVISVEKF HITTQQWDER
AAAYRKKLLD RLEKAAPKDK LAIKDRLQDW QRHFAQYLNK EGAGKQLSWN HRRLIKSFPK
MKMTDSKYFN NYKNDLKSK