Gene Lreu_1792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1792 
Symbol 
ID5189472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1843579 
End bp1844502 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content42% 
IMG OID640591637 
Productcysteine synthase 
Protein accessionYP_001272368 
Protein GI148544998 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0031] Cysteine synthase 
TIGRFAM ID[TIGR01136] cysteine synthases
[TIGR01139] cysteine synthase A 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000703556 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAAAA TCACAAATTC AATCGTAAAT TTAATCGGTA ACACTCCGAT TGTTAAGTTA 
AATCGCGTTG TTCCTGAAGA TGCAGCAGAC GTCTATGTAA AACTTGAATT CTTTAATCCT
GGTGGTTCAA TTAAGGATCG GATTGCCCTT GCCATGATTG AAGAAGCTGA AAAAGCTGGT
AAATTACAAG CAGGTGGCAC CATTGTCGAA CCAACCTCTG GAAACACTGG GGTTGGTTTA
GCAATGGTTG CCGCTGCCAA GGGATACCAT CTTGTCATCA CCATGCCAGA AACAATGAGT
GTTGAACGCC GGAAACTCAT GCAAGGTTAT GGAGCCGAAC TTATTCTTAC TCCCGGTGCC
GACGGAATGA AGGGTGCAAT TGCAAAAGCA GAAGAACTCG TTAAAGAAAA AGGCTACTTT
ATGCCAATGC AATTTGACAA TCCAGCAAAT CCAGCAATTC ACGAAAAAAC TACAGGAAAA
GAAATTCTTG ACGCATTTGG CGATGATATT CCTGACGCAT TTGTTGCTGG GGTTGGTACT
GGAGGAACAC TTACTGGGGT TGGTCATGCA TTGAAAAAAG CTAATCCTAA TGTTCAGGTT
TATGCTCTTG AACCAGCAGA ATCTCCAGTA TTAAAAGAAG GAAAAGGTGG CAAGCACAAA
ATTCAAGGGA TCAGTGCTGG CTTTATCCCG AAAGTTCTTG ATAATGATGT TTATGACGGA
ATCCTCGAAG TTAAGAGTGA TGACGCAATT GCGATGGCAC GTGAAGTCGG TCATCAAGAA
GGAATTCTTG TTGGTATCTC AGCTGGTGCT AATATCAAAG GTGCGATTGA AGTTGCCAAA
AAGCTTGGTA AGGGTAAGCA AGTTATTACT GTTGCTCCTG ATGGCGGTGA CCGTTACCTT
TCAACAGAAT TATTTAATTA CTAA
 
Protein sequence
MTKITNSIVN LIGNTPIVKL NRVVPEDAAD VYVKLEFFNP GGSIKDRIAL AMIEEAEKAG 
KLQAGGTIVE PTSGNTGVGL AMVAAAKGYH LVITMPETMS VERRKLMQGY GAELILTPGA
DGMKGAIAKA EELVKEKGYF MPMQFDNPAN PAIHEKTTGK EILDAFGDDI PDAFVAGVGT
GGTLTGVGHA LKKANPNVQV YALEPAESPV LKEGKGGKHK IQGISAGFIP KVLDNDVYDG
ILEVKSDDAI AMAREVGHQE GILVGISAGA NIKGAIEVAK KLGKGKQVIT VAPDGGDRYL
STELFNY