| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1789 |
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| Symbol | |
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| ID | 5189438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | + |
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| Start bp | 1839822 |
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| End bp | 1840577 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640591634 |
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| Product | ABC transporter related |
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| Protein accession | YP_001272365 |
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| Protein GI | 148544995 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR03608] putative bacteriocin export ABC transporter, lactococcin 972 group |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0954945 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATTAT TAAACCTTCA ACACGTTCAA CGCGTCTATA ATCCTAACTC CGCTAATCCA
GTAATGGCCT TAAAAGATAT TACCTTTAAA GTTGAAGAGG GGGAGTATGT TGCAATTATG
GGAGAATCTG GTGCTGGTAA AAGTACCTTA TTAAATATAA TTGCAACCTT AGAACAAGCA
ACCAACGGAC AGGCAATCCT TAATGGTCAA GATCTCCGGC AGCTTTCCAA AGACGATGCA
GCTCGTTATC GGCGGGAACA CCTCGGCTTT GTTTTCCAGC ATTTCAACTT ACTTGATAGT
CTCTCAAATC GCGACAACGT CTACTTACCA CTTGTTCTAG CAAAAGCTCC GGTAGCAACA
ATGGAAGAAC GGATCAAGCC CTTAATTGAT CGCTTACGTA TTAATAAAAT TATTGATCGT
TTTCCCAGTG AAATTTCTGG AGGCCAGCAA CAGCGAATTG CGATTGCACG GGCGTTAATT
ACCCACCCAG ACCTCCTTCT CGCAGACGAA CCTACTGGAG CTTTAGATTC AAACACCAGT
AACGAAATTC TTGAACTCTT TGATGAAGTT AATGCTAACG GTCAAACAAT TATTATGGTT
ACGCACAGTG CCGCTGCTGC TAGTCATGCT AAACGCACAC TCTTCATTAA GGATGGTCGA
ATCTATCATG AACTCTATCG TGGTGACCTT TCACTTAAAG ACTACCAACA ACAAATTAGT
CAGACAATGA TGACCTTAAC GAATGGCGGT GAATAA
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| Protein sequence | MTLLNLQHVQ RVYNPNSANP VMALKDITFK VEEGEYVAIM GESGAGKSTL LNIIATLEQA
TNGQAILNGQ DLRQLSKDDA ARYRREHLGF VFQHFNLLDS LSNRDNVYLP LVLAKAPVAT
MEERIKPLID RLRINKIIDR FPSEISGGQQ QRIAIARALI THPDLLLADE PTGALDSNTS
NEILELFDEV NANGQTIIMV THSAAAASHA KRTLFIKDGR IYHELYRGDL SLKDYQQQIS
QTMMTLTNGG E
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