Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1779 |
Symbol | |
ID | 5188320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 1832063 |
End bp | 1832845 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640591624 |
Product | protein tyrosine/serine phosphatase |
Protein accession | YP_001272355 |
Protein GI | 148544985 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2365] Protein tyrosine/serine phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAACC AACGCTTACT TCCAATAAAG AATGGCTATA ATTTTCGTGA TCTTGGAGGT TATCCCACAG CAGATGGGCA TCAAATCAAA TGGCATCGGC TTATTCGTAC AGGCTCACTT GCTCGTTTAG ATCAAACTGA TCTCACTGTT TTAGATAATA TTCCTATTTC TCTAGATATC GACCTCCGCG CTCCCGATGA AGTAAAGAAA GACCCTGATC GAGTGCCTTC CCAAGCAAAG TATTATCATT TACCTGTTTT TGAAGCCGAT GAAACAGATG CCTCGCATAG TGATGAAGAA ATCGCCGCGC AGATGCAACA GCCAGGAAAC GGTTATCACC ATATGATTGA TGTTTATCAC CGAATGACCA CGGCTGCTTC AGCCAAGCAA GCTTACCAGA AATTATTTAA TCTCTTATTG AATAATGAAC ATGGTGCCTT GTTATTTCAT TGTACTGCTG GTAAAGATCG GACAGGGATG GCTGCTTATC TTATCCTCAG TGCCCTCGGG GTTGAGCAAA AGATTATTAT GGAAGATTAC CTGCTAACGA ATACTGTTAC TCAAGAGTTT CGTAATCACT GGTTGCAAGA CATGCGTAAT CACGGCGCTA GCGAGGCACT AGTGACAAAC CGGGCAGCCC TTGCCTCAGT AGCTCCTGAT TACCTAAATA CAGCAATCAA AAGCATTACC CAAAATTACG GAAACGTTAA TCAATATCTT AATAATTACC TTGATATTAC GCCTACCGAA ATAAAAGATT TACGAAAATT GTATTTAGAT TAG
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Protein sequence | MANQRLLPIK NGYNFRDLGG YPTADGHQIK WHRLIRTGSL ARLDQTDLTV LDNIPISLDI DLRAPDEVKK DPDRVPSQAK YYHLPVFEAD ETDASHSDEE IAAQMQQPGN GYHHMIDVYH RMTTAASAKQ AYQKLFNLLL NNEHGALLFH CTAGKDRTGM AAYLILSALG VEQKIIMEDY LLTNTVTQEF RNHWLQDMRN HGASEALVTN RAALASVAPD YLNTAIKSIT QNYGNVNQYL NNYLDITPTE IKDLRKLYLD
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