Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1775 |
Symbol | |
ID | 5189254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 1827184 |
End bp | 1828176 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640591620 |
Product | LacI family transcription regulator |
Protein accession | YP_001272351 |
Protein GI | 148544981 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 54 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAGTAA CATTACATGA TATCGCGGAT AAAGCAGGGG TCTCTATTGC GACTGTATCG CGAATTTTAA ATAATGATGT GACGCTTTCT GTAAATGAAA AGACACGTCA GCGAGTGTTA GCCACTGCCG AAGAGTTTAA CTATACTAAG CATAAGCGAG CACGCAATAA CCAAGTACAA CGAGTAGCTG TTGTTCAATG GTATTCTCTT ACGCAGGAAT TGGATGATTT GTATTACATG GCGATTCGGA TGGGAATCGA ACGAGCAGCT CAACAACAGG GACTACAGAC GGTTCCGGTT TATCAAAATA ATATGGAAGA AATTCCTCGC GATGTTACGG GCATCATCGC GATTGGAAAA TTTAGTGATT CGCAAGTTCA AGCATTGCGG TTAGTAACTT CTAATATTGT GTTTGTTGAT TACGATAGTT TGGCTGCCGG TTACGATTGC TTAGTACCGG ACTTTGAAAA TGCAGTGCGG TCAGTTATTT CAGAATTTGT TAGCGAAGGA ATTAACGATA TTGGTATGTT GGCAGGAACT GAAAAGACAA CGGACCAACA AATTGTTCCT GATTTGCGGC GATTCTATTT TGAAAGTAAC TTACGTCAAC AAAACCTTTA TCATCCAGAA TTTATATTTG CTGGCAACTA CACCTCGATG TCAGGATATA ACGCGATGAA AAAGGCAATT GCGACGCTTG GTGACCGTAT GCCGCATGGA ATCTTTGTAG CAAATGATCC GATGGCAGTT GGCGCGCTTA AAGCGATTCA AGAAGCCAAA ATTAACGTTC CGAATCGAAT CGCTCTGATT AGTTTTAACG ATACGGCAAT AGTTAAGTAT GTTTATCCAA GTATGTCAAC AGTACATGTT GCCACTGATG AAATGGCGCA TGCCGCAGTT GATATGATGA TTAAACGGCT GCAGAATCCC AATAATGATC CATGTAAGAC AGTTGTCGGA ACTCACTTGA TCAAACGGCA AACAACCCGA TAG
|
Protein sequence | MAVTLHDIAD KAGVSIATVS RILNNDVTLS VNEKTRQRVL ATAEEFNYTK HKRARNNQVQ RVAVVQWYSL TQELDDLYYM AIRMGIERAA QQQGLQTVPV YQNNMEEIPR DVTGIIAIGK FSDSQVQALR LVTSNIVFVD YDSLAAGYDC LVPDFENAVR SVISEFVSEG INDIGMLAGT EKTTDQQIVP DLRRFYFESN LRQQNLYHPE FIFAGNYTSM SGYNAMKKAI ATLGDRMPHG IFVANDPMAV GALKAIQEAK INVPNRIALI SFNDTAIVKY VYPSMSTVHV ATDEMAHAAV DMMIKRLQNP NNDPCKTVVG THLIKRQTTR
|
| |