Gene Lreu_1771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1771 
Symbol 
ID5188359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1823650 
End bp1824963 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content40% 
IMG OID640591616 
Productsodium:dicarboxylate symporter 
Protein accessionYP_001272347 
Protein GI148544977 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.975695 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGCGAT ATCGTTTCGG GCGCCTCAGT ATGGGCTGGC AAATTATGAT TGGGCTGGCC 
CTTGGTATTA TTTGTGGATT AATTTTCTAT CAAAATAAGA GTGCCATCAC TGTTATGCAG
AGCTTAGGAA CAATCTTTAT CCGGCTGATT CAAATGATCG TAATGCCAAT TGTTGTTTCT
TGCTTGACTG TCGGAATTGC TAATATTGGT GATATTAAAA AGTTAGGTCG GATTGGTGGA
AAAACATTAA TTTATTTTGA AGTTTTAACC ACGATTGCGT TGATTTTAGG GATCGTAATG
GCTAACATTA CTCATCCGGG GTCGTTTATT GATATTCATA AACTTCATGC AACTGATATT
TCGCAATATA TGTCCACCGC AAAATCCGCA GAACATAATA GCGGATTTTG GCCATTAATT
TTGTCGATTA TTCCAACGAA TATTTTTAAA TCCATGTCTG ATGGTGACAT GATGCCTGTT
ATCCTGTTCT CTGTTCTCTT TGGATTAGGG ATTGCAGCTG TTGGGGAAAA GGCTAAAATT
TTAATTAATG TATTAAATGC AGTTTCAGAA GTTATGTTCA AAGTTACTAA TTGGGTCATG
AAGTTTGCGC CAATTGGGGT CTTTGGTTTA ATTGGAATGA CAATCGCCGA AATGGGTATT
AGCGCTCTGT TGCCATTAGG ATTGTTTATT TTAATCGCGT ATGTGACAAT GCTAATTTTT
ATTATCGTTG TCCTCGGTAT TACTGCTCAC ATTTTCCATT TACGTTATTG GAAGACGATG
CGCGCGATTC TTGATGAGAT TGTCTTGGCA TTTACTACTG CTAGTTCAGA AGTTACGTTG
CCTCGCTTGA TGAAAAAGAC GCACGAGATG GGGGTAAGCA AGGGGATTAC AGCTTTTGTT
ATCCCAACTG GTTATACTTT TAACCTTGAT GGATCTGCAA TTTATCAATC ATTAGCAGCG
ATCTTCTTAG CACAAGCATA TGGTCTCCAC CTTAGTCTTT CTCACCAAAT CACGTTGTTA
GTAGTTTTAA TGATTACTAG CAAGGGGATG GCTGGGGTTC CAGGGGCCTC CTTTGTTGTA
TTGCTTGCTA GTGTTTCCAC GATTGGTGTT CCGATGGCTG GCCTGACTTT CATTGCCGGA
ATTGATCGTT TTGTTGATAT GGGACGAACT GCCGTAAACG TGGTTGGTAA TTCAATCGCT
ACGCTGGTTA TCGGTGAATC TGAAGGTGCC CTTGACCGAG AAAAATATAA TGCATATTTA
GATAATTACG GAAAAGAAAA GACACCGACA GAAACTGATG CTGAAGTCGA ATAA
 
Protein sequence
MKRYRFGRLS MGWQIMIGLA LGIICGLIFY QNKSAITVMQ SLGTIFIRLI QMIVMPIVVS 
CLTVGIANIG DIKKLGRIGG KTLIYFEVLT TIALILGIVM ANITHPGSFI DIHKLHATDI
SQYMSTAKSA EHNSGFWPLI LSIIPTNIFK SMSDGDMMPV ILFSVLFGLG IAAVGEKAKI
LINVLNAVSE VMFKVTNWVM KFAPIGVFGL IGMTIAEMGI SALLPLGLFI LIAYVTMLIF
IIVVLGITAH IFHLRYWKTM RAILDEIVLA FTTASSEVTL PRLMKKTHEM GVSKGITAFV
IPTGYTFNLD GSAIYQSLAA IFLAQAYGLH LSLSHQITLL VVLMITSKGM AGVPGASFVV
LLASVSTIGV PMAGLTFIAG IDRFVDMGRT AVNVVGNSIA TLVIGESEGA LDREKYNAYL
DNYGKEKTPT ETDAEVE