| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1769 |
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| Symbol | |
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| ID | 5189207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | - |
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| Start bp | 1822453 |
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| End bp | 1822917 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640591614 |
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| Product | UspA domain-containing protein |
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| Protein accession | YP_001272345 |
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| Protein GI | 148544975 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.00594463 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATCAAG AATATCAAAA CATCCTAGTT CCAGTTGATG GTTCTCAGGA ATCAGAATTT
GCATTGCACC GCGCAATTGC AATCGCAAAG CGTAATGGTG CCCATATAGA TATTTTAAAT
GTAATCGATA CACGAGCAAT GGCTTATAAC TTTGCTGGTA TGTCAGATGG AAGTATTGCC
TATCAATTAG TTGATAAATC AAAGCAATAC CTTGATGAAT TGTTGAAAAA TGCCAAGGAT
AAGGATGGCT TTGATAATCT TGATATCCAC ATTCGTCTTG GTAATCCAAA GACAATTATT
TCGTTTGACT TCCCTCGTGA CCACCACAAC GACATGATTA TTATCGGTGC TAGTGGATTA
TCACGGATAC AACGAGCCGT AATGGGTTCA GTTACGTCAT ACGTAAAGCG GAATGCGCCT
GTTGATGTGC TGGTTGTTCG GACTGATGTA GATCAGGTTA AATAG
|
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| Protein sequence | MDQEYQNILV PVDGSQESEF ALHRAIAIAK RNGAHIDILN VIDTRAMAYN FAGMSDGSIA
YQLVDKSKQY LDELLKNAKD KDGFDNLDIH IRLGNPKTII SFDFPRDHHN DMIIIGASGL
SRIQRAVMGS VTSYVKRNAP VDVLVVRTDV DQVK
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