| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1761 |
|---|
| Symbol | |
|---|
| ID | 5188311 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | + |
|---|
| Start bp | 1812685 |
|---|
| End bp | 1814028 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640591606 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001272337 |
|---|
| Protein GI | 148544967 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGAATG TTATTTTGAA TGAGGGCCAA CTATTCACAA ATTTTATAAT TATCATCATT
ACGTTTATCT TTGCAGCATT CTTTGTAGCA GCCGAGTTCG CCTTAGTGCA AGCACGGGTA
ACGGCCCTAG AAGAAATGCA AGCAAAGCGC GATAAACCAT CTGCGAAAAT AACCCGTGCA
ATCAAAATGG TCACCAATCT AACGGAATAT CTTTCGACCA CTCAAGTAGG GGTTTCAATT
TGTGGAATTA TCCTCGGTTG GGTCGGCGAA GGAACAATTG AAGAGCTCTT AACTGATGCT
CTCTCGCTGC CAAGCTGGTC ACTAAACAAT AGTGTCATCC ATGTTATAAG TGCCATCGTG
GGAGTTCTTC TTCTAACATA TTTTGAAGTG GTCTTAACCG AAATCGTACC TAAAAACATC
AGTATTGATA TTCCAATTAA GACCCTGATG TTTGTTACCA CCCCACTGCA CTATTTTCAC
ATTACTTTTT ATCCTTTCGT CTGGTTGCTC AATAGTTCTG CCAACGGAAT TGTCAAAATG
TTAGGTATGA AGCCAGCCGA TGAGAGTCAA GACGTCCTTT CGCAAAGTGA GATTATTAGC
CTATCTCGAA ACGCTGTCAA AGGTGGTGAG CTTGAACACA ATGACTTGCT ATATATGGAA
CGAGCCTTTG ACTTTAACGA TAAGGTTGCT AAAGATATTA TGATCGATCG CACGCAATTA
ACAGTTATTG ATATCAATAA AACCGTAAAT GACGCGATTA AACTATATCT TAAGACGAAA
TATAGCCGCT TACCGGTAGT TGCTGATAAT GATAAGGATA AGATTTTAGG TTATGTTTTT
AACTATGACT TAATTCGGCA AAAACAAATT AACGGAGATG TATCCTTAGC CAAAGTTCTC
CGCCATATGC CTACTACTCC TGAGACTACC CCAATTACCG AAGTTCTTAA GTTAATGATT
AGTACCCGGG TGCCGATGGT CGTCGTTGTT GATGAGTATG GGGGTACTAG CGGAATTATT
ACTGACAAGG ACATTTATGA AGAATTATTT GGAACGGTGA GAGACGAGAT CGACAATGTT
TCAGATAACA TGATTTCTAA GATTGGTGAA AATCAATACC GGGTTGATGG AAAAACGACC
ATTTATGACT TTGAACGCTT CTTCCATGTT GAACTTAAAG ATTCTGAAGA TAGCGATGTG
GTTACTTTGT CAGGATATGT GTTAGATAAT TATCATAATA TTCATGAAGG AGAAACGATC
AAACTAGCCA ACCTTGATTT AAAAATTCAA GATTATCGCC ATTCATATAT CGATAGCTTT
ATCGTTACTA CTTTATCAAA GTAA
|
|---|
| Protein sequence | MRNVILNEGQ LFTNFIIIII TFIFAAFFVA AEFALVQARV TALEEMQAKR DKPSAKITRA
IKMVTNLTEY LSTTQVGVSI CGIILGWVGE GTIEELLTDA LSLPSWSLNN SVIHVISAIV
GVLLLTYFEV VLTEIVPKNI SIDIPIKTLM FVTTPLHYFH ITFYPFVWLL NSSANGIVKM
LGMKPADESQ DVLSQSEIIS LSRNAVKGGE LEHNDLLYME RAFDFNDKVA KDIMIDRTQL
TVIDINKTVN DAIKLYLKTK YSRLPVVADN DKDKILGYVF NYDLIRQKQI NGDVSLAKVL
RHMPTTPETT PITEVLKLMI STRVPMVVVV DEYGGTSGII TDKDIYEELF GTVRDEIDNV
SDNMISKIGE NQYRVDGKTT IYDFERFFHV ELKDSEDSDV VTLSGYVLDN YHNIHEGETI
KLANLDLKIQ DYRHSYIDSF IVTTLSK
|
|---|
| |