| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1752 |
|---|
| Symbol | |
|---|
| ID | 5189319 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | - |
|---|
| Start bp | 1805318 |
|---|
| End bp | 1806025 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640591597 |
|---|
| Product | major intrinsic protein |
|---|
| Protein accession | YP_001272328 |
|---|
| Protein GI | 148544958 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
|---|
| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATGGAT TTATTGGCGA ATTTTTTGGC ACCATGGTTT TAATCCTATT AGGAGCAGGA
TGTTGTGCTG GTAATAGTTT GAATAAAACA TATGGGAAAC AAAGTGGCTG GTGGTTTATC
TGTATTTCAT GGGGCTTAGC AGTTACAATG GGAGTTTATG TTGCAGGATT TCTGGGTTCA
TTAGGGCACT TAAATCCCGC TGTAACAATT CCTTTTGCTA TTTTTGGCTT ATTCCCATGG
AGTAACGTTA TACCTTACTT ACTTGGTCAA TTTCTTGGTG CGTTTGTTGG TGCAGTATTA
GTAATTATTC AATTCTATCC ACAATTTAAA GCAACCCCAA ATGAAGAAGA AGGAAATAAT
GTTGGTATTT TTGCTACTCG TCCAGCGATA AATAGTCCAA TTTTTAACTT TTTCTCAGAA
GTGATTGCGA CCTTTGCATT TATTTTCATC TTATTAAATC TTGGCAACTT TACACAGGGA
TTGAAGCCAT TTATCGTAGG AATGGTTATT GCAGTTGTTG GTACATGTCT CGGGACAACT
ACTGGCTTTG CATTAAACCC AGCTCGTGAT TGGTCACCAC GTTTAGCATA TACTATTTTG
CCAATTCCTA ATAAGGGTGT TTCAGAATGG TGGTATGCAT GGGTTCCAAT GTGTGGCCCA
ATTGTTGGGG GCCTTCTTGC TTGTGCTTTA CAAACGGCAC TAGTTTAG
|
|---|
| Protein sequence | MHGFIGEFFG TMVLILLGAG CCAGNSLNKT YGKQSGWWFI CISWGLAVTM GVYVAGFLGS
LGHLNPAVTI PFAIFGLFPW SNVIPYLLGQ FLGAFVGAVL VIIQFYPQFK ATPNEEEGNN
VGIFATRPAI NSPIFNFFSE VIATFAFIFI LLNLGNFTQG LKPFIVGMVI AVVGTCLGTT
TGFALNPARD WSPRLAYTIL PIPNKGVSEW WYAWVPMCGP IVGGLLACAL QTALV
|
|---|
| |