Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1748 |
Symbol | |
ID | 5188715 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 1801931 |
End bp | 1802647 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640591593 |
Product | microcompartments protein |
Protein accession | YP_001272324 |
Protein GI | 148544954 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4816] Ethanolamine utilization protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 62 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATGATT TTCTGAATTC TACTAGTACT GTTCCAGAAT TTGTTGGTGC TAGCGAAATT GGAGATACCA TTGGAATGGT AATTCCGAGA GTTGATCAAC AACTATTAGA TAAATTACAC GTTACAAAAC AATACAAGAC TTTAGGTATT TTGAGTGATC GTACTGGTGC TGGTCCACAA ATTATGGCAA TGGATGAAGG AATTAAGGCT ACTAACATGG AATGTATTGA TGTTGAATGG CCACGTGATA CTAAAGGTGG AGGAGGCCAT GGATGTTTAA TTATCATCGG TGGTGATGAT CCTGCAGATG CACGCCAAGC TATTCGGGTT GCACTTGATA ATCTTCATCG TACATTTGGT GACGTTTATA ACGCCAAAGC GGGTCACCTT GAATTACAAT TTACAGCTCG TGCTGCAGGT GCTGCACATC TTGGATTAGG TGCAGTTGAA GGGAAAGCAT TTGGGTTGAT TTGTGGTTGT CCTTCCGGGA TTGGTGTCGT GATGGGAGAT AAGGCTTTAA AGACTGCTGG TGTTGAACCG CTTAACTTTA CTTCACCAAG TCATGGTACA AGTTTCTCTA ACGAAGGTTG CCTAACTATT ACCGGTGACT CAGGAGCTGT TCGTCAAGCT GTTATGGCTG GACGTGAAGT AGGATTAAAG TTATTGTCAC AGTTTGGTGA AGAACCAGTT AATGATTTCC CATCATACAT TAAGTAG
|
Protein sequence | MNDFLNSTST VPEFVGASEI GDTIGMVIPR VDQQLLDKLH VTKQYKTLGI LSDRTGAGPQ IMAMDEGIKA TNMECIDVEW PRDTKGGGGH GCLIIIGGDD PADARQAIRV ALDNLHRTFG DVYNAKAGHL ELQFTARAAG AAHLGLGAVE GKAFGLICGC PSGIGVVMGD KALKTAGVEP LNFTSPSHGT SFSNEGCLTI TGDSGAVRQA VMAGREVGLK LLSQFGEEPV NDFPSYIK
|
| |