Gene Lreu_1748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1748 
Symbol 
ID5188715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1801931 
End bp1802647 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content41% 
IMG OID640591593 
Productmicrocompartments protein 
Protein accessionYP_001272324 
Protein GI148544954 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4816] Ethanolamine utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGATT TTCTGAATTC TACTAGTACT GTTCCAGAAT TTGTTGGTGC TAGCGAAATT 
GGAGATACCA TTGGAATGGT AATTCCGAGA GTTGATCAAC AACTATTAGA TAAATTACAC
GTTACAAAAC AATACAAGAC TTTAGGTATT TTGAGTGATC GTACTGGTGC TGGTCCACAA
ATTATGGCAA TGGATGAAGG AATTAAGGCT ACTAACATGG AATGTATTGA TGTTGAATGG
CCACGTGATA CTAAAGGTGG AGGAGGCCAT GGATGTTTAA TTATCATCGG TGGTGATGAT
CCTGCAGATG CACGCCAAGC TATTCGGGTT GCACTTGATA ATCTTCATCG TACATTTGGT
GACGTTTATA ACGCCAAAGC GGGTCACCTT GAATTACAAT TTACAGCTCG TGCTGCAGGT
GCTGCACATC TTGGATTAGG TGCAGTTGAA GGGAAAGCAT TTGGGTTGAT TTGTGGTTGT
CCTTCCGGGA TTGGTGTCGT GATGGGAGAT AAGGCTTTAA AGACTGCTGG TGTTGAACCG
CTTAACTTTA CTTCACCAAG TCATGGTACA AGTTTCTCTA ACGAAGGTTG CCTAACTATT
ACCGGTGACT CAGGAGCTGT TCGTCAAGCT GTTATGGCTG GACGTGAAGT AGGATTAAAG
TTATTGTCAC AGTTTGGTGA AGAACCAGTT AATGATTTCC CATCATACAT TAAGTAG
 
Protein sequence
MNDFLNSTST VPEFVGASEI GDTIGMVIPR VDQQLLDKLH VTKQYKTLGI LSDRTGAGPQ 
IMAMDEGIKA TNMECIDVEW PRDTKGGGGH GCLIIIGGDD PADARQAIRV ALDNLHRTFG
DVYNAKAGHL ELQFTARAAG AAHLGLGAVE GKAFGLICGC PSGIGVVMGD KALKTAGVEP
LNFTSPSHGT SFSNEGCLTI TGDSGAVRQA VMAGREVGLK LLSQFGEEPV NDFPSYIK