| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1721 |
|---|
| Symbol | |
|---|
| ID | 5188933 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | - |
|---|
| Start bp | 1779702 |
|---|
| End bp | 1780661 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640591566 |
|---|
| Product | adenosylcobinamide-phosphate synthase |
|---|
| Protein accession | YP_001272297 |
|---|
| Protein GI | 148544927 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
|---|
| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 54 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATCC TAATAATGGT TATACTAGCA TTCATTTTTG ATTTTTTACT TGGTGACCCT
CATTCGTGGC CGCATCCAGT TAAAGCAATG GGTCATTTAA TCGCGTACCT AACTAAGAAA
TTTAATCGTT CAAACTATTC AACGAAAAGA AAGAAGTGGT TTGGCGCTTT GACTTGGCTA
ATAACGGTTG GTGGGTCAGG ATTAATTACA TATATATTGA TGCGATTTGC GGCAATTAAT
TATTATCTCT ATATGATCGT TGGAACTTAC CTTTGCTATA CTTGCCTCTC TATGCGTCAA
TTGGCAATTG AAGCAGAAAA AATTATGAAA AGTCTTCAAC AAAATAATTT AAATAAAGCT
CGCCAGCAGG TGGGGATGAT TGTAGGACGT GATACTAATC AATTAAGTGC TGAAGAGGTA
ACAAAAGCAA CGATTGAAAC AGTTGCCGAA AATACTAGTG ATGGTGTAAT CGCGCCACTG
TTCTTTTTGG TAATTGGTGG TCCAGTTTTA GGAATAATGT ATAAAGCCAT AAATACTTTA
GATTCGATGA TTGGTTATCA GAATGAAAAA TTCCGCGCTT TTGGGGAGGT ATCTGCCCGA
ATTGATGACA TTGCAAATTA TGTTCCAGCA CGAATCACAT GGTTACTACT GATTATTAGC
AGTTGGTTGT TACGTGATGA CACTCGGGAG GCAATTGCTG TAGGTGAACG TGATTGTGAG
AAGCATCTAA GTCCTAATAG TGCTTTTAGT GAAGCTGTTG TTGCAGGTGC CTTACATTTG
CAATTAGGTG GTCCACATTA TTATTTTGGC GAATTGGTTA AAAAGCCTTA CATCGGTAAT
GATCATCTTG TAATTGCTGC AAATTGGCAT TTAAAAAGAA CGATTACAAT GTTGTACCTT
ACATCATTCC TGGGATTATG TGGATTTGAA CTTATACGAT TCTTAATAGT TTGGAAGTGA
|
|---|
| Protein sequence | MNILIMVILA FIFDFLLGDP HSWPHPVKAM GHLIAYLTKK FNRSNYSTKR KKWFGALTWL
ITVGGSGLIT YILMRFAAIN YYLYMIVGTY LCYTCLSMRQ LAIEAEKIMK SLQQNNLNKA
RQQVGMIVGR DTNQLSAEEV TKATIETVAE NTSDGVIAPL FFLVIGGPVL GIMYKAINTL
DSMIGYQNEK FRAFGEVSAR IDDIANYVPA RITWLLLIIS SWLLRDDTRE AIAVGERDCE
KHLSPNSAFS EAVVAGALHL QLGGPHYYFG ELVKKPYIGN DHLVIAANWH LKRTITMLYL
TSFLGLCGFE LIRFLIVWK
|
|---|
| |