| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1689 |
|---|
| Symbol | |
|---|
| ID | 5188922 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | + |
|---|
| Start bp | 1750161 |
|---|
| End bp | 1751597 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640591534 |
|---|
| Product | peptidase U34, dipeptidase |
|---|
| Protein accession | YP_001272265 |
|---|
| Protein GI | 148544895 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4690] Dipeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAA ATCTATCTGC TTGTACAACC GTTCTTGTAG GCCGTAACGC TACAATTGAT
GGTTCAACCA TGGCAGCACG GAACGATGAT ACTTTCGCTC CACTTACACC ACAACGTTTT
GTAACTTATC CGGCATATCA TAATCATCCT AATCAAGTTA AAGCTTATTT AAATAAGTGT
GTGATTGATC GCCCCGCTGA TGGTTACCGT TATCAAGGTA CTCCTAATGT CGATTACAAA
ACTGAAGGGG TTTTTGACGA AAGTGGTTTT AATGAAAAGA ACGTTGGGAT GAGCGCCACA
GAAAGTGTTT ATGCTAATGC ACGGGTTTTA GCCTGTGATC CGCTTAATAC TGAAACAGGA
ATTAATGAAG ACCTTATCGT CGCCGCTACC CTTCCCTTCA TTGATAGTGC ACGCGAGGGG
GTTGCTTACC TCGGTAAATT AATCGCTAAA TACGGTTCTG CAGAAGGAAA CGGGGTTATT
TTCAGTGACA AAGATGATGT TTGGTATATG GAAATCGTTA CTGGACATCA CTGGGTTGCC
CAACGGATTC CAGATGATGC ATACGCTGTT ACTGGAAATC GAATTGCCAT TCAACAAGTT
GATTTTAATG ATAAGGCTAA CTTTATGTGG TCTGACGGAA TTCAAGAATT TGTTGCAAAG
AACCACCTCA ACCCAGACAA GTATGAATGG AATTTCCGCC ATATTTTCGG AACTGCTGAT
ATTTTTGATC AACACTACAA CACTCCACGA CAATGGTACG GTCATAAGGT ATTAAATCCG
GAAACTGAAT TTGATCCGCT TGATTTTGAT ATTCCATTTA TTATGCAAAC GGATCATCGA
ATTACCCTTG AAGACGTTGA AAAGATCCTC AGTAGCCACT ACCAAGGAAC CCCTTACGAT
CCACTAGGTC ATGACGGTAC CGACCAGCAA AAGCATATGT TCCGGCCAAT TTCACTAAAC
CGGACGCAAA ATTCCCACGT TCTTCAGGTT CGTAATGACT TACCGGAAGC TGCTTCAACG
ATTATGTGGA TGAGCTTTGG TATTCCTACC TTTACCCCAT ATGTTCCATT CTTTGGTAAT
GCTGAAGATA TCGATGTAAG CTATCGTGAA ACACCAGAGA AACTTAATAT GGATTTAAAG
AGTGCTTACT GGATGTATCG GGCGCTTTCA ATGATTGTCG AATCACACCA TGCAGAATTT
TCTAAGGCCG ACTTAGATTA TCTCAAAGAT GCCCGCGAAT ACCTCTACGG CTGGGTCAAT
GAAGTTGCTC CACAGGTTAA GGGGATGTCA TCTTCTGAAG TCAGTGCTTT CTTAAGTTCA
AAGACACATG AAATGGTTGC CGAAATGGCT AAACGAACAA AAGCTTTAAT GGCTGAGTTA
GTAATGAACG GACTCGAACT TTCTAAGTTA ACATTCCAAA TCGATAAGAA CTTGTAA
|
|---|
| Protein sequence | MKKNLSACTT VLVGRNATID GSTMAARNDD TFAPLTPQRF VTYPAYHNHP NQVKAYLNKC
VIDRPADGYR YQGTPNVDYK TEGVFDESGF NEKNVGMSAT ESVYANARVL ACDPLNTETG
INEDLIVAAT LPFIDSAREG VAYLGKLIAK YGSAEGNGVI FSDKDDVWYM EIVTGHHWVA
QRIPDDAYAV TGNRIAIQQV DFNDKANFMW SDGIQEFVAK NHLNPDKYEW NFRHIFGTAD
IFDQHYNTPR QWYGHKVLNP ETEFDPLDFD IPFIMQTDHR ITLEDVEKIL SSHYQGTPYD
PLGHDGTDQQ KHMFRPISLN RTQNSHVLQV RNDLPEAAST IMWMSFGIPT FTPYVPFFGN
AEDIDVSYRE TPEKLNMDLK SAYWMYRALS MIVESHHAEF SKADLDYLKD AREYLYGWVN
EVAPQVKGMS SSEVSAFLSS KTHEMVAEMA KRTKALMAEL VMNGLELSKL TFQIDKNL
|
|---|
| |