Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1672 |
Symbol | |
ID | 5188831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 1731307 |
End bp | 1732476 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640591517 |
Product | major facilitator transporter |
Protein accession | YP_001272248 |
Protein GI | 148544878 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000000335684 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATATC GTTTACAAGC TATTATTTTT GTCTTCGTTG CCTTTATGCT TGGGTGTAAC GAATATATGA TTGTCGGCGT TTTACCTGAT ATTGCTCATG AATACCATGA TTCACTTGGT AAGTTAGGCC TACTTGTAAC TGTGTTTGCC TTGGTTTATG CTATCTTTAC TCCGATTATT ACTTCAATGG CAAATCGGTG GCGACGACAT CATGTCTTAT TAGTTCTCAT GGTCATTTTC TTTATCGGCA ATACCTGGAC AGCGATGGCG CCAAACTTTA TTTCAATGTT GCTTTCACGG ATTCTAACCG CTAGTGTTGC CGGTGCGATT ATCTCAATGG TCCTCGTAAT GGCGAGCTAT GTTGCGCCGC GCGAAAAAAG AGCAAGCCTG GTTTCATGGG TTTTTGCTGG ATTTAGTATC GCGTCAGTTA TCGGTATTCC AATCGGGACC GTTATCAGCA CTACCCTTAC TTGGCATGAT AGTTTTTGGA TGATTTCTGG AATAACAATC ATTGTTTTTG TCGCCTTACT CTGGCTCGTC CCACGTGATA CGCCTCAATT TAAGAGTACC CTTAGTAAAC AATTTGTGTT ATTTAAGGAT TCTCGAATCA TTCTCGGTGT TAGTTTCATC GTTGCTACTT GTGCGGCTGA CTACACAATT TATACCTATA TTCGACCTTT AATCACTAAC GAAATGGGCT TTGATAATAC TTGGTTAAAT TGGCTCTTAT TCGGAATGGG AATTTTCTTT ATTATTGGTA ATAAATTTGG TGGCTACCTG GCGGACCGTG GCGGAATCCA CCGACTCAGT GGAATCTACG CGGCAATGAC AGTCTTATTT CTCATCTTTG GCCCCGTCTT ACCATTCAAG TGGGGCGCCA TTATTATTGT GGCTGTCTTA TGTATTGCCT TTTCATGCTA TGGCTCTTCC ACCCAATTGA TGTTCCTCGA TATTGCCGAA AAACAATATC CTCAATCACT TGACTTAGCT TCATCTCTAA ACTCGATTTT TGCTAATATT GGTATTTCGC TGGGCTCTTT TACTGCCTCT CAGGCTGTCA CCTTCACTGC CATGAAAAAT CTCGGTTACG TTGGTGCAGT CTATGGGCTT CTCGCAACAA TACTAGTCAT CGTCCTTAGC AAAAAATATA CGGGGATGCG CAATTATTAA
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Protein sequence | MKYRLQAIIF VFVAFMLGCN EYMIVGVLPD IAHEYHDSLG KLGLLVTVFA LVYAIFTPII TSMANRWRRH HVLLVLMVIF FIGNTWTAMA PNFISMLLSR ILTASVAGAI ISMVLVMASY VAPREKRASL VSWVFAGFSI ASVIGIPIGT VISTTLTWHD SFWMISGITI IVFVALLWLV PRDTPQFKST LSKQFVLFKD SRIILGVSFI VATCAADYTI YTYIRPLITN EMGFDNTWLN WLLFGMGIFF IIGNKFGGYL ADRGGIHRLS GIYAAMTVLF LIFGPVLPFK WGAIIIVAVL CIAFSCYGSS TQLMFLDIAE KQYPQSLDLA SSLNSIFANI GISLGSFTAS QAVTFTAMKN LGYVGAVYGL LATILVIVLS KKYTGMRNY
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