Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1641 |
Symbol | |
ID | 5188445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 1698198 |
End bp | 1699502 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640591487 |
Product | major facilitator transporter |
Protein accession | YP_001272218 |
Protein GI | 148544848 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0119358 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATATA CAAAGAAGAA TTACAAAAAA GCACCTTTAT CATCAATTCA CTTTCGAATA TATTTTGCCC TCGCTCTTGG ACAAATTGCT TGTGGTTTTG CTCTTGGAAT TAGTGGAACC GCACTTTCCC AAGCAACTGA TTATATCAAT ATCCCCGACT TTTGGGTTGG CCTAATTGGT GCTGGGAGTT TAATTGGACT TGCTGGGAGT GCTTTAATGG GTAAAATCGC TGACCAATTT GGCCGACGAA GAATGTTGAT GCTCGATATG TATCTTTTTT CTATATTTTC TCTTTTGCAA TTAGCAACAA TGAATCTTGT TATCCTGTTT ATCTTACGGA TTTTAATCGG TTTAATGATT GCTATTGACT ATACTGTTGG GAATGCTCTA TTGGTAGAAT GGTTACCAGT AAAAGAAAGC GGCCGCCTAC AGAGCCAACT AATCGTTTAC TGGACAATTG GCTTTATTAC TTCATACATT GCAGGAATTT TAATAACAGG GTTTGGCACT CATAATTGGC AAGTTATCCT TGCATCAAGT GTCGTTCCAG GACTGATGGC TGCAATCTAT CGGTCAATCT TCCGGATTCC GGCATCCCCG AGCTGGTTAG CAAGTCAAGG TAAGAATAAA ACTGCTCAAA AACTAATTCA AAAACACCTT GGGAAAAAAT GGGGATTATC ATTAAAACAA ATTCGTAGTA AAAAACCAAA AGCTGTCTCT CTTAAAACCC TCTTTAATCC CCCTTATCGC CGAAAAACCA TTGTTGGTGG CTTATTCTAT GCTTGTCAGG CATTTTCATT TTTCGGTATC AGTATCTTCT TACCAATTCT CCTAAAAAGT ATGGATCTTG GTAATAACAA CCTCTCTGGG ATTATCTATA ATAGTTGCGT CCTTATCGGC GTAATTTTCG GTAGTTTAAT CTTCAAGATT CTTAGCAGGC GGATGTTTTT GGTAAGAACA TTTTTCCTTT CAGCAGCAGC CCTTATCTTA TTAATAATTG GCAATAACTT TTCATCTTTC TTCCAAATTA GCGTTTTTGC GATCTTTGCG ATAGTCTTAT CTTCAGGACT TGTCCTTGAT TATCCATATC CAACAGAACT ATTTGATGTT AAGGTTCGAG CCAGTGGAGT TGGTACTTGT ATCACTATCA GTCGTTTTGG GGCTGCTAGT GGAACATTCT TATTACCAAT CTTAACTCAT CTTGGCGGTC CCATTTTAGC AATGCTAGTT TGTACTCTTG TTTTACTTAT AGGTGGTACT ATCTGTCTTT TATGGGCACC TGAAACTTCA CCAAAATATA TTTAA
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Protein sequence | MEYTKKNYKK APLSSIHFRI YFALALGQIA CGFALGISGT ALSQATDYIN IPDFWVGLIG AGSLIGLAGS ALMGKIADQF GRRRMLMLDM YLFSIFSLLQ LATMNLVILF ILRILIGLMI AIDYTVGNAL LVEWLPVKES GRLQSQLIVY WTIGFITSYI AGILITGFGT HNWQVILASS VVPGLMAAIY RSIFRIPASP SWLASQGKNK TAQKLIQKHL GKKWGLSLKQ IRSKKPKAVS LKTLFNPPYR RKTIVGGLFY ACQAFSFFGI SIFLPILLKS MDLGNNNLSG IIYNSCVLIG VIFGSLIFKI LSRRMFLVRT FFLSAAALIL LIIGNNFSSF FQISVFAIFA IVLSSGLVLD YPYPTELFDV KVRASGVGTC ITISRFGAAS GTFLLPILTH LGGPILAMLV CTLVLLIGGT ICLLWAPETS PKYI
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