Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1640 |
Symbol | |
ID | 5188233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 1696631 |
End bp | 1698022 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640591486 |
Product | amino acid permease-associated region |
Protein accession | YP_001272217 |
Protein GI | 148544847 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000000819091 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTTAA ACATTATGCG AAAAGAAAGT CTCGATCGGT ATCTTGGTGA AGACAAGCTT TTCGTTAAAT CAATGAATGC TCGTGATCTC ATGGCAATTG GGATCGGTAC TGTTATTGGT ACTGGGATTT TCATTCTCCC TGGAACAATT GCCGCAAATT CAGCTGGACC AGGAGTGTCA TTGTCATTTC TGTTTTCAGC GATTGTCTGT GCGCTAGCTG CAATGTGTTA TGCTGAGTTT GCTTCTGCAT TACCAGTTGC TGGGAGTGCA TACTCGTACG GAAATGTAGT GTTTTGTGAA TTCCTTGGCT GGTTGCTTGG ATGGGCATTA GTTCTTGAAT ACATGTTAGC TGTTGCATCT GTTTCTACAG GTTGGGCAGC CTACTTCAAT ACATTACTTG AAGGATTTGG TATTCATCTT CCTAAAGCAC TCTCAGGTCC ATTTGATCCA GCCCATGGTA CCTACATAAA TATCGTGGCG GTTGTAATTG TTCTTTTAAT TACAGTAATG CTTGCACGGG GGATGCAATC TTCACTGCGT ATCAACAACA TTGCTGTTTT CCTTAAGATT GCAATTATCT TGATCTTTAT TATTGTTGGT TTCTTCTTCA TCAAGCCCAA AAATTACCAT CCATTCCTTC CATACCACAT GAAGGGTGTT ATTCACGGGG CAACGATTGG TTTCTTTGCT TATCTTGGGT TCGACTGTGT TTCTAGTTCA GCCGCCGAAG TTAAGAATCC TAAACGGAAT ATGCCGCTGG GAATTATTGG GACACTTGCT GTTGCAACCA TCTTATATAC TGGTGTTGCC GTAGTCCTAA CTGGGATGGT TAAGTACACC AAACTTGATG TTGCTAATCC AGTGGCATTC GCCTTACAGA TGGTTCATCA AGACTGGTTG GCAGAATTAT TATCAATTGG GGCTTTGATC GGAATGTTCA CAATGATGGT TTCGATGATC TATTCTAGTT CTCGTTTGAT CTATGCAATT GGTCGTGACG GTCTGCTTCC TTCATTCTTA GGCAAGCTTG ATGAAAAAAG TCACTCGCCA CAAATTGCAT TATGGATCGT GGCGATTATT ATCGCTATCA TGGGCGGACT TGTTTCTCTT GATCAACTTA CAAGTTTAGT TAACATCGGA ACCTTGTTTG CTTTCATGCT CGTTTCATTT GGAATTATTC CGCTTCGTAA GCGAAAGGAT ATCGGTAATC GTGGGGGCTT TAAGGTTCCC CTCTACCCTG TTCTTCCAAT TCTTTCTGGT CTTGCCTGCC TTGGCATGAT GACCCAGTTG CAAAAAGAAA CGTACATTGG CGCAGCGATT TGGTTTGGAA TTGGAATTGT CATCTACTTC ACTTACGGCT ACTGGCACAG TAAGTTAGCA GATAAGAATT AA
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Protein sequence | MSLNIMRKES LDRYLGEDKL FVKSMNARDL MAIGIGTVIG TGIFILPGTI AANSAGPGVS LSFLFSAIVC ALAAMCYAEF ASALPVAGSA YSYGNVVFCE FLGWLLGWAL VLEYMLAVAS VSTGWAAYFN TLLEGFGIHL PKALSGPFDP AHGTYINIVA VVIVLLITVM LARGMQSSLR INNIAVFLKI AIILIFIIVG FFFIKPKNYH PFLPYHMKGV IHGATIGFFA YLGFDCVSSS AAEVKNPKRN MPLGIIGTLA VATILYTGVA VVLTGMVKYT KLDVANPVAF ALQMVHQDWL AELLSIGALI GMFTMMVSMI YSSSRLIYAI GRDGLLPSFL GKLDEKSHSP QIALWIVAII IAIMGGLVSL DQLTSLVNIG TLFAFMLVSF GIIPLRKRKD IGNRGGFKVP LYPVLPILSG LACLGMMTQL QKETYIGAAI WFGIGIVIYF TYGYWHSKLA DKN
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