| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1632 |
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| Symbol | |
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| ID | 5189346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | - |
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| Start bp | 1689584 |
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| End bp | 1692451 |
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| Gene Length | 2868 bp |
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| Protein Length | 955 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640591478 |
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| Product | membrane protein-like protein |
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| Protein accession | YP_001272209 |
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| Protein GI | 148544839 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1511] Predicted membrane protein |
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| TIGRFAM ID | [TIGR03057] X-X-X-Leu-X-X-Gly heptad repeats
[TIGR03061] YhgE/Pip N-terminal domain
[TIGR03062] YhgE/Pip C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000847897 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGAGCA TGATTAAAGG CGAATTTCGT CATATTATTC ATAACCGTTT ACTGCTTTTA
TCAGTAACGG TTATTTGCTT AATACCTTTC CTATATAGTA TTTTCTTCTT AAAATCAGTA
TGGGACCCGT ATGGAAGTAC ACGTAACTTA CCAGTTGCGG TGGTAAATAA GGATATTCCG
GTTGAATACC AAGGCCAGAA AATGGATGTT GGGAAACAGA CCGTTAATGA ATTGAAGAAA
AATCACCAAT TAAAATGGGA ATTCGTATCC GCTAAAGAAG CAAAATATGG TATGAGTCAT
CGCAAGTACT ATGCGGTGGT TACGATTCCT AAAGATTTCT CTGAAAATGC AACGACTGTT
TTGCAAAAGC ATCCTAAGAC GATGAAGTTA CATTATCAAA CTAATGGTTC CTTGAACTAC
ATTGGACAGG TAATTGCCCA AACAGGGATG ACACGGCTAA ATGAAAAAAT TCGTGCCCAG
GTTACTAACG CTTACGCAAC GGTAATGTTT AAGCAATTAC ATGTTGTAGG TAAGGGGATG
AACAAGGCCG CTGATGGTGC CCAACAAATT GGTACCGGAA TGGTGACCTT GAGTGATGGT
GTAAATCGTT ATGTTGCAGG AGTTTCCCAA GTAAATAACG GGGTTCAAAC CTTGCGTGTT
AGCGTTGCAC CATTAGCTTC TGGTGCGCAA CAACTTGCTA CCGGGAGCCA AACCTTAGCA
AATGGTATTA TGCAATATAC TGGTGGGGTT AGTCTCCTCG GCAATGGTGT TGGCCAATTA
ATGGCTAATT CCGGTGCACT AAATTCCGGT GCTAACCAGT TGAGCAGTGG ATTAAGCACT
TTGATGGCTA ACTCTGGTGC GTTAAATTCT GGTGCTAGTC AGTTGAATGC TGGATTAAAT
ACTTTAATGG CTAACTCTGG TACCTTAAAT TCTGGTGCTA ACCAATTAAG TAGTGGTTTG
AATACGTTAA GTGGTAATTC AGAGAACTTA AGGAACGGTT CAGGTCAATT AGCATCTGGT
GCTAATCAGT TGAATTCAAC CGTTAACAGT CAGTTAGGAA ACATTAACTT TAATGGGATT
ATGGGGGCCA TGGATCAAGC ACAAAATCTT CAGCAAGGGT TAGGTCAACT CCAGACCGGT
TTGACAACTG CTAAGAATGC TCTTGCTGGT GTTCAAAGTA GTGCTGCTAG TCTTCAACAA
GCTTCAGGAG CATTATCTGG TGCTGCCAGT GCTGGTGATC AGCTTAAAGG TGTTGCAACT
AACGATGGTC AAATTGCTGG ATTGGCACAA CAAATTCTTA GCGATGATAA AGCTAGTGAA
CAATCCAAGC AGGCTGCTCA ACAAATTGTG CAAAAAGCCG ATGCTAATGT TGCTGCTATT
CAAGGATTAA GTGGAACCCT TGGTCAATTG AGTAACCTTC AAGGAAGCTT GAGTGGTATG
CAACAACAAT TAGGTCAGCT TTCACAAATG TCTGCTGTGT TAGATAATGC GGATGGGACT
ATTCGTCAAG CTAACGCATT ATTAGCAACC TTAAATGGCT ATAAAGGCAC CTTAGCGGCA
ATGCCAGGAG CTGTTGATCA ACTTAAACAA GCAACAAGTC AGATTTCTTC TGGAGCAAGC
ACGCTTAATA GTGGTGTAAA TCAATATACT AATGGTGTTG ATAGTGCTGC TGCCGGTGCT
GGTACGCTTA ATTCAGGAAT TGGTCAATAC ACAGCAGGTG TTGCTCAAGC TGGAGCCGGT
GCCAATCAAT TAGCTAGCGG AATCGGTCAA TACACAGCTG GGGTCGCGCA AGCTGGAGCC
GGAGCTGGTC AATTGGCTAG TGGAATCGGT CAATATACAG CAGGTGTTGG TCAATTAGGT
AACGGAATTG CCCAGCTTAA CGCTAATAGC GGGGCCTTGA ACTCTGGTGC AGCTCAATTA
GCTGGTGCGC TTGGTCAACT AAACGGTCAA GTTCCTGCTC TTGTTGCTGG TGTAAATCAA
TTAGCTGCCG GAACTCAACA ACTTCAAGAT AATTCTCCTG CTCTTATTTC AGGAATTGCG
CGGTTGAATG CTGGTGCTTC TCAATTGGCT ACATCTCTTG CAGGTGGTGC AAAGCAAATC
AATGGTATTA AGACTTCACC ACGGACTGCC AAGATGTTTG CAGAACCAAC TGCTCTTAAG
CACACAGATT ACAGTTATGT ACCAAACTAT GGTCACGCCT TAGCACCATA TGTTCTATCA
TTAGCAATAT ATGTTGGGGC ACTTGTATTT AACTTTGTTT ACCCAATTCG CCGGGTTGCT
GAATTTGGTA AAGCTCCAAT CGCTTGGTGG GCAAGTAAGG TAACAGTTGG ATCACTGGTA
GTAACTGCAA TGGCAATCGC TGAAGACGCA ATTATGATGG CGTGTGGACT TACAGTTATT
CACCCAGTCT CATTCTTTGT GACGACGATA TGCTTCGGGT TAGCCTCAAT GGCAATTGTT
ATGTTCCTTT CAATGCTCTT TGATAACCCC GGTCGATTCT TTGCCATGGT TCTCTTGATG
CTTCAATTAG GTGGATCTGG TGGTACCTTC CCAATGGAAA TTACAATGAA GTTCTATAAC
GTAATTCACT GGTACTTACC AATGACTTAC TCAATCTTAG GACTCCGTGA TTCAATTTCT
GGTGGTTTGG GAGCACATTA CACGATGTTC TGTAACACTG TTCTTATCGT AATCGCAATT
GTCTTCTATG CATTGTTACT AGTCGGTATG ATTTGGTTAC AACATCATCA CTATGCTGGT
CGCTCGGAAT TGGATAATAA CCAAGAACTG CTTGGACCAG AAGGCGATTA TGACGGTATG
CACCTTCAAC AACGTCGCCC AAACCAAGGA GATAATGGCG AACAATAA
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| Protein sequence | MWSMIKGEFR HIIHNRLLLL SVTVICLIPF LYSIFFLKSV WDPYGSTRNL PVAVVNKDIP
VEYQGQKMDV GKQTVNELKK NHQLKWEFVS AKEAKYGMSH RKYYAVVTIP KDFSENATTV
LQKHPKTMKL HYQTNGSLNY IGQVIAQTGM TRLNEKIRAQ VTNAYATVMF KQLHVVGKGM
NKAADGAQQI GTGMVTLSDG VNRYVAGVSQ VNNGVQTLRV SVAPLASGAQ QLATGSQTLA
NGIMQYTGGV SLLGNGVGQL MANSGALNSG ANQLSSGLST LMANSGALNS GASQLNAGLN
TLMANSGTLN SGANQLSSGL NTLSGNSENL RNGSGQLASG ANQLNSTVNS QLGNINFNGI
MGAMDQAQNL QQGLGQLQTG LTTAKNALAG VQSSAASLQQ ASGALSGAAS AGDQLKGVAT
NDGQIAGLAQ QILSDDKASE QSKQAAQQIV QKADANVAAI QGLSGTLGQL SNLQGSLSGM
QQQLGQLSQM SAVLDNADGT IRQANALLAT LNGYKGTLAA MPGAVDQLKQ ATSQISSGAS
TLNSGVNQYT NGVDSAAAGA GTLNSGIGQY TAGVAQAGAG ANQLASGIGQ YTAGVAQAGA
GAGQLASGIG QYTAGVGQLG NGIAQLNANS GALNSGAAQL AGALGQLNGQ VPALVAGVNQ
LAAGTQQLQD NSPALISGIA RLNAGASQLA TSLAGGAKQI NGIKTSPRTA KMFAEPTALK
HTDYSYVPNY GHALAPYVLS LAIYVGALVF NFVYPIRRVA EFGKAPIAWW ASKVTVGSLV
VTAMAIAEDA IMMACGLTVI HPVSFFVTTI CFGLASMAIV MFLSMLFDNP GRFFAMVLLM
LQLGGSGGTF PMEITMKFYN VIHWYLPMTY SILGLRDSIS GGLGAHYTMF CNTVLIVIAI
VFYALLLVGM IWLQHHHYAG RSELDNNQEL LGPEGDYDGM HLQQRRPNQG DNGEQ
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