Gene Lreu_1626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1626 
Symbol 
ID5188601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand+ 
Start bp1685059 
End bp1685709 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content40% 
IMG OID640591472 
ProductSNARE associated Golgi protein 
Protein accessionYP_001272203 
Protein GI148544833 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones67 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCATA TTTTTTATCT TCTAACTCAT ATTGCGGAAA TAATTATTCC CATGTTTGAG 
TGGATGGGCG CTTGGAGCTA TGTTCTCCTT TTTATCCTAA TTTTTATGGA AACTGGATTA 
GTGATTTTCC CATGGTTTCC TGGTGAATCA CTCGTCTTTT TAACTTGTTC TTTCATTGCT 
TTTAACCCGA TCTTAAAAAT GGAAATCGTC ATCCCCGTTT TCTTTTTCGC GGCGCTAATT 
GGTGACACAG TTAATTATTA TATTGGTCAT TCCCTTTCTC ATTGGCAATG GCTCAAAAAA 
AGAATGGCCG GTCCCCGCTT TGAGAAAGCA CAAGAATTTT TAGCCCGTCA TGGGATCAAA 
GCTGTAGCAT TAGGGCGATT TGTACCGCTC ATTCGTACCT TTGTCCCCTT AATTGCTGGA 
ACAATGCAGT TTCCATTTCA CCGTTTCACA ATTGGTAATA TTATTGGCGT TACATTATGG 
GTAGCGATTG GTGCTGGATG TGGATATTAC TTTGGAACAA TTCCGTTTGT CCGTCAGCAC 
TTCTCACTTA TCATCTTAGC ATTTGTTGTG TGTTCACTGT TAGGAGTTGG CTTGTTAGCA 
CTTATCAAAG CGATTCGTCA ACGAATTATT AAGCGAAGCC GAATGCTATA A
 
Protein sequence
MSHIFYLLTH IAEIIIPMFE WMGAWSYVLL FILIFMETGL VIFPWFPGES LVFLTCSFIA 
FNPILKMEIV IPVFFFAALI GDTVNYYIGH SLSHWQWLKK RMAGPRFEKA QEFLARHGIK 
AVALGRFVPL IRTFVPLIAG TMQFPFHRFT IGNIIGVTLW VAIGAGCGYY FGTIPFVRQH 
FSLIILAFVV CSLLGVGLLA LIKAIRQRII KRSRML