| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1625 |
|---|
| Symbol | |
|---|
| ID | 5188308 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | - |
|---|
| Start bp | 1682533 |
|---|
| End bp | 1684839 |
|---|
| Gene Length | 2307 bp |
|---|
| Protein Length | 768 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640591471 |
|---|
| Product | superfamily I DNA/RNA helicase-like protein |
|---|
| Protein accession | YP_001272202 |
|---|
| Protein GI | 148544832 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3973] Superfamily I DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTACGA AAACTGAAAA AGAACTAGAA CAAAAGTACC TTGATAATGT GATTGATAAA
GTAAAACAGG CCGAACAAAA AGCAGAAGAA AAGATTAAAA CGGCTCAACA TGATATTAAG
GGCATCAATA AGCAAATTGA TGATATCCAC TTAAATACCA CTACTTATTC AGGCATGATG
GATACGGCCA TGTCTTTTCG TGCTCAACAG CAGATGCTAG ATGAACGTCA AAATAGCTGG
CAACACGCTG CAGACCGGCT AGCAACTTTA CAGCGACTTG AAAAGAAACC TTACTTTGCT
CGCATTGATT TTCGTGAAAA AGGTGCCAAT GAATCCGAAA AGGTATATAT CGGGCTTGCA
TCTTTTACCG ATAAGCCAGA TCACTTTCTT GTTTATGACT GGCGAGCACC GATTTCGTCT
GTTTACTATG AAGGAAAGCT CGGGAAAGTT AAGTACCAGA CTCCGGTAGG TGAACAAGAG
GTTGATCTTA CTCTTAAGCG CCAATTCCAA ATTAAAGATG GCGTGATTGT AACCATCTTT
GATACCGACG AACAAGTAGG CGACCAGATG CTTCTTGATG CTCTTGGTAA CCATTCAAGT
ACCAAGATGA AGAGCATTGT AACGACGATT CAACGGAAAC AAAATGAAAT TATTCGTGAC
ACTAAAAATG AATTGTTGTT TGTTCAGGGG GCTGCTGGCT CGGGAAAGAC AGCTGCAGTT
CTCCAACGGG TTGCCTGGCT TCTTTACCGT TACCGGGGTA ATTTGACCTC TTCACAAGTT
GTTCTTTTTT CACCTAACCA ATTATTTAAT GACTACATTG ATCAAGTTTT ACCGGAATTG
GGTGAGCATA ATATGGTCCA GATGACTTAC TTCCAGTTTG CTAATCGTCG GGTACCAAAG
CTTCATGTTC AAAACTTAGA ACAACGGTTT GAAAGTCACC AAGATGAAAC GGCTAAGAAT
GCACAACAAC TATTAACTAG CTTACAATAT TTCAAAGCAA CAGAGCGTTA TGCTAACCAT
CTTGGTCATG CTAATATGCG TTTCCGCAAC CTTATGTTTA ATGGTAAAGT CTTTTTGAGC
AAAGATAAGA TTAAGGAGAT TTACTACTCA TTTAACAATA ACTATAACCT GGGAAATAGG
TTGGATGGAA CGAAAGAAGC TCTTATTAAA TACCTTAATC ACCGTGTTGG ATCTGAAATG
CGCAACAAAT GGGTAGAGGA TGAAATTCAA AGCTTGAGTA AAGAAGAAAT CGACAACCTA
TTTAATAACC AGCCACGTGA ATTTGAGGAT GAAGATAAAG AATACAAGTT CCTTGCGCGT
CAAATCGTTA TGCGGGCATT TATGCCAATA AAAAAAGCCA TCGATCATAA TCAGTGGCTT
AACATCAATG GACAATTTTT ACACCTTCTC CGGGTAACTC CAAAACTTGT TAATATTGCT
GAATACGGTA TTTCTGCAGA GCAATGGAAA GGTTATGTTG ATGGGATAAA AGAAGAGCTA
AAGAAGGGAA ATATCAGTGC AAACGGAATT ACCATTTACC TGTACCTGTA TGATTTGATT
ACTGGAAAGC GTGGTCAACG TGATATTCGT TACGTTTTTG TTGATGAAGT TCAAGATTAT
GATGCTTACC AGTTAGCTTA CTTTAAATAT CGTTTTCCCC GTGCTAAATT CACATTGTTA
GGAGACCTTA ACCAGGCGAT TTTCACTCAT GAGAATAGTC GGTCACTATT AAAGCAGTTA
GGGACGATGT TTGATCCAGA AAAGACGAAG GTTGTCCAAT TAACTAAGTC TTACCGTTCC
ACGAAACAAA TTACCGACTT TACTAAGCAT ATTTTAATTG ACGGTGAAGC AATTGAGGCC
TTTGAACGTG AAGGTAATAA GCCACAAGTT TATCAAACTA AGGATGAACA AGAAGGGGTA
GCGGCAGTTA TTAATATTCT TAATAAGTAT CAGAATGACC ATGATGCCGT CGCAATTATT
GGTAAAGATC TCAAAGACAG TGAAGAGTTG TATCAAAAGT TAAATGCCAA TAATATCAAG
ACCACCGTTA TTCGGACAGA GAATCAACGG TTAGTAAAGG GGCCAATTGT TGTGCCGTCA
TATCTAGCAA AAGGGTTGGA ATTTGATGCG GTTATTGTCT GGAATGCGAA TGATCAGCAA
TACCATGGTA ACGATGAGCG ACAATTGTTA TATACAATTT GTTCTCGAGC AATGCATGAG
TTAAGCTTAG TATCAATTGG CAGGACAACT AGTTTGCTGA ATCAAGTGCC GACAGATGAA
TATGAAAAAG TTAATGTTGA TAAATAA
|
|---|
| Protein sequence | MSTKTEKELE QKYLDNVIDK VKQAEQKAEE KIKTAQHDIK GINKQIDDIH LNTTTYSGMM
DTAMSFRAQQ QMLDERQNSW QHAADRLATL QRLEKKPYFA RIDFREKGAN ESEKVYIGLA
SFTDKPDHFL VYDWRAPISS VYYEGKLGKV KYQTPVGEQE VDLTLKRQFQ IKDGVIVTIF
DTDEQVGDQM LLDALGNHSS TKMKSIVTTI QRKQNEIIRD TKNELLFVQG AAGSGKTAAV
LQRVAWLLYR YRGNLTSSQV VLFSPNQLFN DYIDQVLPEL GEHNMVQMTY FQFANRRVPK
LHVQNLEQRF ESHQDETAKN AQQLLTSLQY FKATERYANH LGHANMRFRN LMFNGKVFLS
KDKIKEIYYS FNNNYNLGNR LDGTKEALIK YLNHRVGSEM RNKWVEDEIQ SLSKEEIDNL
FNNQPREFED EDKEYKFLAR QIVMRAFMPI KKAIDHNQWL NINGQFLHLL RVTPKLVNIA
EYGISAEQWK GYVDGIKEEL KKGNISANGI TIYLYLYDLI TGKRGQRDIR YVFVDEVQDY
DAYQLAYFKY RFPRAKFTLL GDLNQAIFTH ENSRSLLKQL GTMFDPEKTK VVQLTKSYRS
TKQITDFTKH ILIDGEAIEA FEREGNKPQV YQTKDEQEGV AAVINILNKY QNDHDAVAII
GKDLKDSEEL YQKLNANNIK TTVIRTENQR LVKGPIVVPS YLAKGLEFDA VIVWNANDQQ
YHGNDERQLL YTICSRAMHE LSLVSIGRTT SLLNQVPTDE YEKVNVDK
|
|---|
| |