| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1613 |
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| Symbol | |
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| ID | 5188488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | - |
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| Start bp | 1667440 |
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| End bp | 1669209 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640591459 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_001272190 |
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| Protein GI | 148544820 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.050548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAATC TTGCTGCTAT CTACCACCGG CCGGAAAGCG AAATGGCCTT TCTTTATGAC
TCTCAGACGA TGCATATCCG TTTACGGACT GCTAAAGATG ACGTAAAAGC GGTCCAGCTA
TTGCACGGTG ACCCTTACAG TCTTCGCAGC CTGGCGGGAA TTAAACCGCC ATTTTATACC
AAACCGACGC CGATGAAGAA AATCTTGTCA GATGACCTCT ATGATTATTG GCAGATTGCG
GTTACCGAGC CGAAAAAGCG CTTGGCGTAT GCCTTTGACA TCACTGGCGC TGATGGGACG
AGGACGGTTT ATACCGACCG GGGCTACCTT CAGCCAGATG ACCACGCTGC CTTGAATGAT
TTAAATACCT ACTTTCGGAT GCCCTTCTTC CAAGAGATTG ATATGTTTCA TGCTCCAGAA
TGGGTAAAGA AAACGGTTTG GTACCAGATT TTCCCCGATC GCTTTGCCAA TGGTGATCAG
TCCAACGACC CTGCTGGTAC TAAAAAGTGG AATGCCAATG ACCATCCTGG TCGTCAGGAT
TTCTATGGTG GTGACTTGCA GGGTGTACTG GACCACCTTG ACCACCTTCA AGCATTGGGT
GTCAATGGGA TCTACTTTAA CCCGCTTTTT AAAGCCCCTT CTAACCATAA GTATGATACA
GAAGACTATT ACCAGATTGA TCCTCACTTT GGTGACGCCG CCTTATTTAA GGAAGTGGTT
GCCCAGGCTC ACAAGCGGGG GATTAAGGTA ATGCTAGATG CCGTCTTTAA CCATATTGGT
GATAAGTCGC CACAGTGGCA GGACGTCCTT AAAAACGGCC AAAACTCGAA ATATGCTGAT
TGGTTCCATG TTAATAAGTT CCCAGCAACT TACACGCCGA CCAAGAACTT TGAATTTACC
CCGGATGCAA CTTACGATAC CTTTGATTAC ACACCGCATA TGCCGAAACT CAACACAGCT
AACCCAGCAG TGCAGGATTA CTTGTTGGGA ATTGCCAAAT ATTGGATTGA AGAATTTGAT
ATTGATGCTT GGCGGCTGGA TGTGGCCAAT GAAATTGACC ACCACTTCTG GAAGAGGTTC
CATCAGGAGA CAACGGCCCT CAAACCAGAT TTTTATATCC TAGGTGAGAT TTGGCATACC
TCGCAGGCGT GGCTGAACGG GGACGAATTT AGCGGGGTAA TGAACTACAG CTACACCGGT
GCTATTTTGG ACCACTTCAT CAACCACCGG CTTAGTGCGG AACGAATGAT TGATCAGCTT
AGCAACCAGC TGATGAAGTA CCGTGACCAG ACTAATCAGA TGATGTTTAA TGTCTTGGAT
TCTCATGATA CAGCGCGAAT TATGACTCAG GCCCACGATA ACCGGGACCT AGTCAAGCAA
ACTTTTGCCT TTACATTCTT GCAGCCTGGA ACACCGTCAA TTTACTATGG CACCGAGTAC
GGCATGGATG GAGACAATGA TCCGGACTGT CGGAAGCCAA TGAACTGGGC GCCTGACGAT
GATGCTCAAG AAATGCTTGC ATATTTTAAG AAGCTAGTCG CATTACGTCG TGACTATGCC
GACCTAATTG CAGGCGGGAC AATTGCATTT AATGTCCTGC CAATCGGGGT GGTGGAAGTT
TCCCGTACAG GTGCTGGGAA AGTGCTTAAA GGGTTCTTTA ACACTACGGG CGCACCAGCG
GAGTTAGCAA CCAGGGGCCA ACTGCTTCTT AGTCAGGGAA TGCAGGGGCA CCAGCTGGCT
CCAGACGGTT TTGCGATAAC AATTGAATAA
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| Protein sequence | MMNLAAIYHR PESEMAFLYD SQTMHIRLRT AKDDVKAVQL LHGDPYSLRS LAGIKPPFYT
KPTPMKKILS DDLYDYWQIA VTEPKKRLAY AFDITGADGT RTVYTDRGYL QPDDHAALND
LNTYFRMPFF QEIDMFHAPE WVKKTVWYQI FPDRFANGDQ SNDPAGTKKW NANDHPGRQD
FYGGDLQGVL DHLDHLQALG VNGIYFNPLF KAPSNHKYDT EDYYQIDPHF GDAALFKEVV
AQAHKRGIKV MLDAVFNHIG DKSPQWQDVL KNGQNSKYAD WFHVNKFPAT YTPTKNFEFT
PDATYDTFDY TPHMPKLNTA NPAVQDYLLG IAKYWIEEFD IDAWRLDVAN EIDHHFWKRF
HQETTALKPD FYILGEIWHT SQAWLNGDEF SGVMNYSYTG AILDHFINHR LSAERMIDQL
SNQLMKYRDQ TNQMMFNVLD SHDTARIMTQ AHDNRDLVKQ TFAFTFLQPG TPSIYYGTEY
GMDGDNDPDC RKPMNWAPDD DAQEMLAYFK KLVALRRDYA DLIAGGTIAF NVLPIGVVEV
SRTGAGKVLK GFFNTTGAPA ELATRGQLLL SQGMQGHQLA PDGFAITIE
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