Gene Lreu_1603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1603 
Symbol 
ID5189112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand- 
Start bp1657184 
End bp1658344 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content38% 
IMG OID640591449 
Productmajor facilitator transporter 
Protein accessionYP_001272180 
Protein GI148544810 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.000182217 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAAAT TTCGCTTGCA GTCCGTTGTT TTTGTCTTAA CCGCATTTTT ATTAGGATGT 
AATGAATTTA TGATTGTGGG GGTTATTTCT GATATTGCCA AAAGTTACCA TGCTTCATTA 
TCAACGGTTG GCTTTTTAGT TACTAGTTTT GCAATTATTT ATGCTATCTG CACGCCTTTA 
ATTACCACTT TGACAGGTAA GTTTGATCGT TTTAAGGTTT TGATGGTGCT AATGCTAATC 
TTTTTAATCG GTAACACTTT AACCGCAGTT GCGCCTAACC TATTTTGGCT ATTTGTTTCG 
CGGATTGTAA CAGCTGCGGT CGCGGGGACA ATTATTTCAT TGATTCTTGT ATTTGTAAGT 
ATGATTGCGC CCATTGAAAA ACGGGCAATG CTGGTCGCTT CAACTTTCAC TGGTTTTAGT 
ATTGCTACGA TTGTAGGGGT CCCCGTTGGA ACGGCAATTA GTAATGCTTT TTCTTGGCGG 
GATAGTTTTG CCCTCATTTC GGTTTTAACA GTAATTATTT GTGGCTTTTT ATATTGGCCG 
ACACCACGGG ACAGTCGTCA AGAAAATGCT TCGTTAAGTA ACCAAGTTCA ACTTTTTAAG 
GATCGGCGAA TAATTCTTGG GGTTATCGTA ATGGTAACAT TAATGTCCGC TGAATATACT 
TTCTATACTT ATGTTCGCCC CATTATTACC AATGTTCTTG GGTTTAGTAC GACTAACTTA 
ACATGGCTAT TAGGACTTAT TGGAATTACG TTTATTCTTG GTAATATATG TGCCGGCGTA 
ATCGCAAATC GTTTTGGGAT CACTAAACTT ACAATTATTA GTAGTACTGT TCTTATTTGT 
TTGTTGTTGA TGAATGCAAT GTTCCATGTT GCATGGTTAG GAATTCTGTT ATTGTGTGTT 
ATTTGTTTTG TTCTAGGAAT GCCCGGTTCA ATTCTGCAAG TAATGTTTCT GAACATTGCT 
GATCGGGAAT ATCCAGAAGC AATGAATCTG GCTTCTTCAT TAAACCCAAT TTGTACTAAC 
GTGGGAGTAT CGATTGGTTC CTTGACAGCA TCGATCAGTA TCAATTTTGT TCAAATTAAC 
CAGATTGGGT ATGTTGGGGC AATCTATGCA TTGGTTGCCG TTTTTGGTTC GTTCTATCTT 
ATTAAAACCA GCGCCAAATA G
 
Protein sequence
MSKFRLQSVV FVLTAFLLGC NEFMIVGVIS DIAKSYHASL STVGFLVTSF AIIYAICTPL 
ITTLTGKFDR FKVLMVLMLI FLIGNTLTAV APNLFWLFVS RIVTAAVAGT IISLILVFVS 
MIAPIEKRAM LVASTFTGFS IATIVGVPVG TAISNAFSWR DSFALISVLT VIICGFLYWP 
TPRDSRQENA SLSNQVQLFK DRRIILGVIV MVTLMSAEYT FYTYVRPIIT NVLGFSTTNL 
TWLLGLIGIT FILGNICAGV IANRFGITKL TIISSTVLIC LLLMNAMFHV AWLGILLLCV 
ICFVLGMPGS ILQVMFLNIA DREYPEAMNL ASSLNPICTN VGVSIGSLTA SISINFVQIN 
QIGYVGAIYA LVAVFGSFYL IKTSAK