Gene Lreu_1588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1588 
Symbol 
ID5190116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand- 
Start bp1644366 
End bp1644980 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content40% 
IMG OID640591435 
Producthypothetical protein 
Protein accessionYP_001272166 
Protein GI148544796 
COG category[S] Function unknown 
COG ID[COG2364] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCGGT ATGTATTTTT AGCACTGGCG ATTGTCTTAA ACTCAATTGG TCATTCAATG 
ACGATTGTAA CAAACTTAGG GAGTATGCCA TGGCCAGCCT CCATCGTCAA TATTATGCAT 
ATGATGGGCT GGAACATGAC AGAGACGATT TTTACAGAAG GACTATTTGT CATTGGCCTT 
AATATCCTTT TGGTTGGTGA ATTTGTCCCT AAAGAATTTG GCTGGGAATT AACGTTTTTA 
GTTCCGTACA GTATTTTAAT GCAACTTTTT GCGAACTTAT GGCGCTTTTG GGGAATCGAT 
ACGATGAACA TTTTCCTGCG CTTCGGTTTT GACCTACTCG GCTTAGTGAT TGCCTTTGCC 
GGGTATGCTC TTTACCAACA GTGTGATTGT TGTTTTCATC CACACGATAA GTTAACAGTC 
TACTTAAAAC GGCGCGCCAG TCTTAAATTC ACGAAATACT TTAACATTGT CTTGCCCGTT 
ATCATTATCT TGTTATGTTC TCTTAAAAAT CATGCAATCT TTGCTTTTAA TATTGGAACG 
GTGATCGGCT TTTTCTCTCA GAACTGGATT GTCAGTTTCT GGCAGGAACG CCTCGAACCG 
TGTTGTCATT TCTAA
 
Protein sequence
MRRYVFLALA IVLNSIGHSM TIVTNLGSMP WPASIVNIMH MMGWNMTETI FTEGLFVIGL 
NILLVGEFVP KEFGWELTFL VPYSILMQLF ANLWRFWGID TMNIFLRFGF DLLGLVIAFA 
GYALYQQCDC CFHPHDKLTV YLKRRASLKF TKYFNIVLPV IIILLCSLKN HAIFAFNIGT 
VIGFFSQNWI VSFWQERLEP CCHF