Gene Lreu_1587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1587 
Symbol 
ID5188426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand- 
Start bp1643656 
End bp1644342 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content41% 
IMG OID640591434 
Productpeptidase M10A and M12B, matrixin and adamalysin 
Protein accessionYP_001272165 
Protein GI148544795 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.815835 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCGAT TTTTAGTAGC ACTCTTAGTC GCTGGCATGG TTGGAATTGG CGATTATCAT 
GTCCTTGCTG ATGCAGATGC GCCTTCTCAA CCCTTCCAAT CATCATTTTT TAGCCAGGAT 
TCTTCTAATA GTAATGATTT TCAGTTTTCT AATGGTGGCC AACGACCAAA TGCAGACCGG 
CTAAGAATCC CAGAAAATAC ACCGACACCG CTTGAAGGCT TTAAGTGGAA GAAAAAGAAT 
ATTACTATTT ATATGGAAAC GGCTGATCCT AAATTAAAAT GGGCTTTTCG TGATGCGGTC 
AAAAAGTGGA ACAAGACGAA AGCAGTTCAT ATCCGCTGGA CTAAGAACGA AGATAAGGCT 
AATATTATTG CGGCCGATGG TGATCTAGCA CGAAATAATA CGGGAAACAA TGGTGTTGGC 
TATACAACAT CTGAACTCGG CTCAACCCGG ACTGAATATG ATCCGACTAC GAATACCTTG 
CATAAGGCAA CCTCAACTTT GGACCCTAAC CAGTTAGACT ATACTAATAA AGAATTTCGA 
AGTGAGGTTG CACAACATGA ACTGGGACAT GCACTTGGAT TAGCCCACGC TCCAGAATAT 
GAGCATAGTG TGATGATCCC ACGAAATATC AAAAACGGAA TAACTAAAAA TGATGCTAAA 
ACGTTAAGAA TGTTATATCG TGAATAA
 
Protein sequence
MRRFLVALLV AGMVGIGDYH VLADADAPSQ PFQSSFFSQD SSNSNDFQFS NGGQRPNADR 
LRIPENTPTP LEGFKWKKKN ITIYMETADP KLKWAFRDAV KKWNKTKAVH IRWTKNEDKA 
NIIAADGDLA RNNTGNNGVG YTTSELGSTR TEYDPTTNTL HKATSTLDPN QLDYTNKEFR 
SEVAQHELGH ALGLAHAPEY EHSVMIPRNI KNGITKNDAK TLRMLYRE