Gene Lreu_1509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1509 
Symbol 
ID5189156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand- 
Start bp1560649 
End bp1561332 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content42% 
IMG OID640591359 
Producthypothetical protein 
Protein accessionYP_001272091 
Protein GI148544721 
COG category[S] Function unknown 
COG ID[COG1814] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0134552 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCCAAGA AAAAGATGTC ACTAGCACAA AAGGTAAACG TTCTGCGTGC AAGTGTGATG 
GGGGCTAATG ATGGGATTAT TTCAATTGCC GGAATTGTTA TCGGGGTGGC AGCGGCAACG 
AGTAATGCCC GTTCTATCTT AATTGCAGGT TTGTCGGGAA CACTTGCCGG GATGATTTCA 
ATGTGTATGG GGGAGTATGT CTCGGTTTCA ACCCAAAAGG ACTCGCAAAA AATGGCATTG 
ATTAGTGAAA AGCAACGCCT TCAAAATCAA TACCAGCATG AATTTGACTA TGTTCAAAAG 
AAATATGAAG CTCAAGACAT CGATTCGCAA CTAGCTAAAC AAGCGACGAA AGAATTAATG 
GAAAAAGATG CTTTAGGGAC AACTGTTCAA GAGCGCTATG GCTTTAATCC CAATGAGTTT 
ACAAGCCCAT ATGCTGCGGC GATTGCTTCC TTTATATCTT TTCCAACCGG TTCAATTTTA 
CCGATGGTGG CGGTTACCGT TTCCCCCACA AACGTTCGAA TTTTAGCAAC CGCAATTGCA 
GTTCTGATTG CCTTGTTAAT TACTGGTTAT TTTGCGGCAG TTTTAGGAAA ATCTAACCGA 
ATTAAGTCAA TGATCAGAAA TGCAGTTGCT GGATTGTTAA CAATGGGAGT TACATACCTG 
ATTGGACAAT TATTTGCGCG GTAG
 
Protein sequence
MSKKKMSLAQ KVNVLRASVM GANDGIISIA GIVIGVAAAT SNARSILIAG LSGTLAGMIS 
MCMGEYVSVS TQKDSQKMAL ISEKQRLQNQ YQHEFDYVQK KYEAQDIDSQ LAKQATKELM 
EKDALGTTVQ ERYGFNPNEF TSPYAAAIAS FISFPTGSIL PMVAVTVSPT NVRILATAIA 
VLIALLITGY FAAVLGKSNR IKSMIRNAVA GLLTMGVTYL IGQLFAR