Gene Lreu_1507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1507 
Symbol 
ID5189255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand+ 
Start bp1558956 
End bp1559876 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content39% 
IMG OID640591357 
Productcation diffusion facilitator family transporter 
Protein accessionYP_001272089 
Protein GI148544719 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1230] Co/Zn/Cd efflux system component 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0924835 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGAAA AAGTAACAGG GAAACGCTTT TTAGCAGTTC CCCTCCTAAA TGTATTAATT 
ACAATTGTTG AAATTCTTGG AGGTATTCTC TCTGGAAGTT TAGCCTTACT ATCAGACGCT 
TTTCATAACT TGGGAGATTC GCTTTCCATT GTACTAGGCT ATTTTGCCCA GCATATTGGG 
GGACAGCCAG AGAATCGGCA ACGAACTTAT GGCTACCGGC GAGCTGAAAT CCTCTCAGCA 
TTAACTAATA GTATTTTCCT GATTGTTATC TCTGTCTTCT TAATTATTGA AGCTATCAAA 
CGGTTAGAGC ATCCTCAGCA TATTAACGGG GGCATTATGT TAACCGTGGC CGTGATTGGT 
CTTCTTGCAA ACTTTATTTC CGCAGCCCTT TTACATGCTG GTAGCGAAGA CAGCTTAAAT 
GTTAAAGCAA CTTATCTCCA TATTCTAAGT GATGCACTTT CATCAGTTGC CGTTATCATT 
GGAGGAATCA TTCTTACCTT TGTTAATGTT CCATGGCTTG ATCCCGCCTT GACAATTGGG 
GTTGCCCTCT ATATTGCTTA TGAGGCTTGG CCAATTATTA ATCAAACCAT TAAAATTCTC 
ATGCAGTCCT CCCCAGATCT TGATTATAAT TCCATCGAAA ATGATTTAAA GCAAATCGAC 
GGAGTTACGG CAGTTCATCA CGTCCATGCA TGGATGATGG ATGAACACCG AATCATTTTC 
TCTGCCCATC TTAATTGTGA TGACTTGCCA CTAAGCCAGG TTGAGCGAAT CTATAGTCAA 
GTAGAAAAAA TCTTGTATGA AAAATATGGG ATCTGTCACG TTACTATTCA AGCAGAATAT 
CACCGTGGGA AAGATGAAAA ATTATTCAAC ACTCCTGTTG ATGAAAAGAA CGTTATTAAT 
AACGATTTCA AAGAGGACTA A
 
Protein sequence
MDEKVTGKRF LAVPLLNVLI TIVEILGGIL SGSLALLSDA FHNLGDSLSI VLGYFAQHIG 
GQPENRQRTY GYRRAEILSA LTNSIFLIVI SVFLIIEAIK RLEHPQHING GIMLTVAVIG 
LLANFISAAL LHAGSEDSLN VKATYLHILS DALSSVAVII GGIILTFVNV PWLDPALTIG 
VALYIAYEAW PIINQTIKIL MQSSPDLDYN SIENDLKQID GVTAVHHVHA WMMDEHRIIF 
SAHLNCDDLP LSQVERIYSQ VEKILYEKYG ICHVTIQAEY HRGKDEKLFN TPVDEKNVIN 
NDFKED