Gene Lreu_1506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1506 
Symbol 
ID5189211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand- 
Start bp1558099 
End bp1558773 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content37% 
IMG OID640591356 
Productiron dependent repressor 
Protein accessionYP_001272088 
Protein GI148544718 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.152976 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACTCCAA TGAAGGAAGA CTATCTAAAA ATTATTTTTG AATTAGGTGG TAGTCATAAA 
AAAGTTTCTA ATAAAGAGAT TTCCCTTGGA CTAGGAATTG CCGCTGGATC AGTAACCGAG 
ATGATTTCTA AGTTGGCTGA CGAAGGGCTG GTTGTTCATG AACCATATGC CGGTATTTCT 
TTAACGGAAA AAGGACAAAA GTATGCTGCG GAATTAGTTC GGAAGCATCG TTTATGGGAA 
ACATTTTTAG TAGATAAGCT TCACTATAAT TTTGCAGATG TTCATTCAGA AGCGGAAATT 
CTTGAACATC AGACAAGTGA TCGCCTAGCA ACGGCCTTAG ATTCTTTTCT TCAACACCCT 
GATCATTGTC CGCATGGTGG AGTAATTCCA TCAGCTAATG GCAAGTTTCC AGATGTAACG 
CATCGTTTAT TGGCAGATGC TGATGATGGG GAAAAAGTTG AACTAGAACG ATTCTTAGAT 
AATCATGAAC TTCTCACTTA CTTAGAAGAG TTAGGATTAC GACCTCAAGA ACAAGTTACT 
GTAATTCGCC ATGAGCCTTT TGAAGGACCA ATTGTGATTC AAAAAGAAAA TAACGACCAA 
GAAATTAATG TTTCATATAA GGCATCACAT AATATTTTTA TTGAACCGGA CACAGCTCAA 
GAAAATAAAG ATTAA
 
Protein sequence
MTPMKEDYLK IIFELGGSHK KVSNKEISLG LGIAAGSVTE MISKLADEGL VVHEPYAGIS 
LTEKGQKYAA ELVRKHRLWE TFLVDKLHYN FADVHSEAEI LEHQTSDRLA TALDSFLQHP 
DHCPHGGVIP SANGKFPDVT HRLLADADDG EKVELERFLD NHELLTYLEE LGLRPQEQVT 
VIRHEPFEGP IVIQKENNDQ EINVSYKASH NIFIEPDTAQ ENKD