| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1494 |
|---|
| Symbol | |
|---|
| ID | 5188227 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | - |
|---|
| Start bp | 1545692 |
|---|
| End bp | 1548184 |
|---|
| Gene Length | 2493 bp |
|---|
| Protein Length | 830 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640591340 |
|---|
| Product | ATPase |
|---|
| Protein accession | YP_001272077 |
|---|
| Protein GI | 148544707 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000400156 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAATA TGTTCACGCC AAGTGCAAAG CATGTTCTAG CAATTGCACA AGAACAAGCA
AAATACTTTA AACACCAAGC AGTAGGGACT GAACACCTTC TGCTTGCCCT CTCAATGGAT
AAAGATGGGA TTGCTAATAA AATATTTGAA CAATTTTCTA TTACAAACGA TGATATTCGT
GAAGAAATTG AACGCTTAAT TGGCTATGGA ACGATGGAAA ATCTGGGAGC TTCAGATTAT
CTCCCATACT CACCAAAAGC AAAGCAAGTA TTATCGTTAG CTGGTCGAGA AGCCCAACAA
ATGCATGCAT TGAAGATTGG CACTGAACAC TTATTATTAG CCTTAATCGC TGATGAAAGT
GTCCTATCTT CACGGATTTT ATATAGTCTA GATGTTGTGC CACGACAGAT GAGAAAAGTA
ATTTTACGGC GGTTAGGGAT TGCTGATAGT CAGCAACGCA ATCCTAATCG TCAATCATCT
CGTCGACGGA TTCAGCAAAC TGGTACACCA ACATTGGATA AACTAGCTCG TGATATGACA
GAACTTGCTC GGAATGGCCA GCTTGATCCT GTAATTGGTC GAAATAAGGA AGTTAAACGT
GTGGAGCAGA TTCTTAGTCG TCGTACCAAG AACAATCCTG TGCTGATCGG CGAACCTGGT
GTAGGGAAGA CGGCGATTGC TGAAGGGCTT GCTCAGCGGA TGGTTGATGG TAAGGTTCCA
GCTGAATTGG CTAATAAACG TTTGATGATG CTTGATATGG GATCATTAGT TGCGGGTACC
AAGTATCGAG GAGAATTTGA AGATCGCCTT AAGAAAGTGA TTGATGAGAT TCAAAACGAC
GGGCATGTGA TTCTTTTTAT TGATGAACTC CATACCTTAA TTGGTGCTGG TGGCGCTGAA
GGTGCAATTG ATGCTTCCAA TATTTTGAAA CCGGCCTTAG CGCGAGGCGA GTTGCAAACA
ATTGGTGCTA CTACCCTTGA CGAATATCAG AAATATATAG AATCTGATGC AGCACTTGAA
CGACGCTTTG CTACTGTTCA AGTTGATGAG CCAACTACTG ACCAAACCCT GCAAATCCTG
CGAGGACTAC GACCGAAGTA TGAGGAACAC CACCATGCTA AGATTACTGA TGAAGCGTTG
GAAGAAGCGG TTAAATTGTC GGATCGTTAT ATTTCAGATC GTTTCTTGCC GGATAAAGCA
ATTGATCTTA TTGATGAATC GGCAGCTATG GTTCGGATTG ATGCTGAAGA TAAGAAAAAT
CATCAGCCTT CATTAGAAAG TCAGTTAGAA GATTTGCGAA CCCAAAAAGA AGAAGCAATT
GATAATCAAG ACTTTGATCG TGCGGCTACT CTTCGTCAAC AAGAATTAGC ACTAAAAGAT
AAGATTGATC GCAAAAAGCA ACGTACTCAA CAAAAGGATT CTCATAACTA TAAATTGAAA
GTAACTGGTG AAAACATTGC ACAAGTTGTT GCTGAATGGA CAGGAGTTCC TTTAACTCAA
TTGAAGAAGA GCGAGAGTGA ACGATTGGTT AACTTGGAAA AGGTTCTGCA CCAACGAGTA
ATTGGTCAAG ATGAAGCAGT TACCGTAGTC GCTAAGGCAA TTCGGCGTGC ACGAAGCGGG
CTTAAGGATC CTAGTCGGCC GATTGGTTCC TTTATGTTTT TAGGACCGAC TGGGGTAGGA
AAAACAGAGC TTGCCAAGGC ATTATCCGCT GCAATGTTTG GCTCGGAAGA TAATATGATC
CGGATTGATA TGTCAGAATA TATGGAAAAA TATAGTACTA GTCGCTTGAT TGGTGCTGCT
CCAGGATATG TCGGCTATGA CGAGGGTGGC CAATTAACTG AAAAAGTACG GCAACATCCA
TACTCAGTTG TCTTATTAGA TGAAGCTGAA AAGGCACATC CGGATGTATT TAATTTATTA
CTTCAAGTTT TAGATGATGG TTACTTAACT GATGCAAAAG GTCGGCGCGT TGATTTTAGA
AATACCATTA TTATTATGAC TTCTAACCTT GGAGCAACTC AGCTTCAGGA TGAGAAAGAG
GTTGGTTTTG GGGCAAAAGA TATGTCACAA GACTATAATG CGATGGCGGC GGCGATTAAG
CAACAAATGA GGTTATACTT CCGCCCAGAA TTTCTTAATC GGATTGATGA AACGATTATC
TTCCATTCAT TACAAAAGAA AGAACTTCAT CAAATTGTTA AACTCATGGT TAATGATTTA
AATAAGCGGG TAAGCGAGCA AGGTATTAAC TTGAAAGTTA CGCCTGCTGC AATTGATGTG
ATCGCAAAGC TTGGTTACAA TCCCGCTTAT GGAGCTCGTC CGCTTCGTCG TGCTTTACAA
GATCATGTTG AGGATGATTT GAGTACTGGA CTGCTTAGTG GTGAAATCAA TGTGGGGGAT
GACGTAACAG TAGGTGCGCA TCAAGGTAAA ATTACTTTTA AAGTAAAGAA GCCGGATGAA
GATAAAGCTG TTGAATTAAA ATTGAATAAA TAA
|
|---|
| Protein sequence | MDNMFTPSAK HVLAIAQEQA KYFKHQAVGT EHLLLALSMD KDGIANKIFE QFSITNDDIR
EEIERLIGYG TMENLGASDY LPYSPKAKQV LSLAGREAQQ MHALKIGTEH LLLALIADES
VLSSRILYSL DVVPRQMRKV ILRRLGIADS QQRNPNRQSS RRRIQQTGTP TLDKLARDMT
ELARNGQLDP VIGRNKEVKR VEQILSRRTK NNPVLIGEPG VGKTAIAEGL AQRMVDGKVP
AELANKRLMM LDMGSLVAGT KYRGEFEDRL KKVIDEIQND GHVILFIDEL HTLIGAGGAE
GAIDASNILK PALARGELQT IGATTLDEYQ KYIESDAALE RRFATVQVDE PTTDQTLQIL
RGLRPKYEEH HHAKITDEAL EEAVKLSDRY ISDRFLPDKA IDLIDESAAM VRIDAEDKKN
HQPSLESQLE DLRTQKEEAI DNQDFDRAAT LRQQELALKD KIDRKKQRTQ QKDSHNYKLK
VTGENIAQVV AEWTGVPLTQ LKKSESERLV NLEKVLHQRV IGQDEAVTVV AKAIRRARSG
LKDPSRPIGS FMFLGPTGVG KTELAKALSA AMFGSEDNMI RIDMSEYMEK YSTSRLIGAA
PGYVGYDEGG QLTEKVRQHP YSVVLLDEAE KAHPDVFNLL LQVLDDGYLT DAKGRRVDFR
NTIIIMTSNL GATQLQDEKE VGFGAKDMSQ DYNAMAAAIK QQMRLYFRPE FLNRIDETII
FHSLQKKELH QIVKLMVNDL NKRVSEQGIN LKVTPAAIDV IAKLGYNPAY GARPLRRALQ
DHVEDDLSTG LLSGEINVGD DVTVGAHQGK ITFKVKKPDE DKAVELKLNK
|
|---|
| |