| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1483 |
|---|
| Symbol | rplC |
|---|
| ID | 5188492 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | - |
|---|
| Start bp | 1528951 |
|---|
| End bp | 1529610 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640591329 |
|---|
| Product | 50S ribosomal protein L3 |
|---|
| Protein accession | YP_001272066 |
|---|
| Protein GI | 148544696 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0087] Ribosomal protein L3 |
|---|
| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000000000163613 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAAG GAATCTTAGG TAAAAAGGTT GGAATGACTC AAGTATTCAC TGACAATGGT
GAATTAGTTC CAGTTACTGT TATCGATGTT ACACCAAACG TTGTAATGCA AATTAAGACC
GTTGAAAACG ATGGTTACAG TGCTGTACAA CTTGGTTTTG ATGACAAGCG GGAAGTTTTG
AGCAACAAAC CTGAACAAGG TCATGCAGCA AAAGCAAACA CGACCCCTAA GCGCTTCATC
GGTGAAATCC GCGACGCTGA ATTAGGGGAC ATTAAAGTCG GAGACGAAGT TAAGGCTGAC
GTTTTCGCAG AAGGTGAAAC TGTCGACGTT ACGGGTACTA CCAAGGGTCA TGGTTACCAA
GGTAACATCC ATAAAGATAA CCAATCTCGT GGACCTATGG CACACGGTTC TCGTTACCAC
CGTCGTCCTG GTTCATTGGG TGCCATTATC AACCGGGTTT TCAAGGGTAT GAAGCTTCCT
GGTCGTATGG GTGGCAAGAC TGTTACCATG CAACACTTAC AAGTTGTTAA GGTTGATCTT
GACAACAATG TATTACTCAT CAAGGGTAAT GTTCCTGGTG CAAACAAGTC TTACGTAACT
ATTAAGAACT CAGTTAAGGC TAATACTAAG AAGAGTCTTA GCAAACAACA CAATAAATAA
|
|---|
| Protein sequence | MTKGILGKKV GMTQVFTDNG ELVPVTVIDV TPNVVMQIKT VENDGYSAVQ LGFDDKREVL
SNKPEQGHAA KANTTPKRFI GEIRDAELGD IKVGDEVKAD VFAEGETVDV TGTTKGHGYQ
GNIHKDNQSR GPMAHGSRYH RRPGSLGAII NRVFKGMKLP GRMGGKTVTM QHLQVVKVDL
DNNVLLIKGN VPGANKSYVT IKNSVKANTK KSLSKQHNK
|
|---|
| |