Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1482 |
Symbol | rplD |
ID | 5188248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 1528306 |
End bp | 1528929 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640591328 |
Product | 50S ribosomal protein L4 |
Protein accession | YP_001272065 |
Protein GI | 148544695 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0088] Ribosomal protein L4 |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000000984788 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAGCG TTAATTTGTA TAAACAAGAT GGTAGCCAAA ACGGTACTGT TGAATTAAAC GATGCAGTAT TTGGGGTTGA ACCAAATGAA AATGTTGTAT TTGATGCAAT TTTGCGTCAA CGTGCTTCAT TACGTCAAGG TACACATGCT GTAAAGAATC GTTCTGCAGT TAGCGGTGGT GGTAAGAAGC CATGGCGTCA AAAGGGTACT GGTCGTGCTC GTCAAGGTTC TATCCGTTCT CCACAATTCC GTGGTGGTGG TATTGTTTTT GGACCTACTC CACGTTCATA TAAGTACAGC CTTCCTCGTA AGGTTCGTCA ACTTGCAATC AAGTCTGCCC TTTCCCAAAA GGTTCTTGAT AACAGCTTTG TAGTAGTTGA TGCATTAAAT TTTGATGCAC CAAAGACAAA GGAATTCGCT GATGTTATGG GTAACTTAAA CGTTGCTGAA AAGACATTAG TTGTTGTTAC TGATGACGAC AAGAATGCTG CTTTATCAGC ACGTAACTTA GCTAATGCTA CAGTTGTTAC TCCAGCAGGT GTTAACATCT TGAACGTTGT TGATAACCAA AAGATTGTTA TCACTAAGTC AGCTCTTTCT CAAGTAGAGG AGGTGCTCGC ATAA
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Protein sequence | MTSVNLYKQD GSQNGTVELN DAVFGVEPNE NVVFDAILRQ RASLRQGTHA VKNRSAVSGG GKKPWRQKGT GRARQGSIRS PQFRGGGIVF GPTPRSYKYS LPRKVRQLAI KSALSQKVLD NSFVVVDALN FDAPKTKEFA DVMGNLNVAE KTLVVVTDDD KNAALSARNL ANATVVTPAG VNILNVVDNQ KIVITKSALS QVEEVLA
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