| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1477 |
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| Symbol | rpsC |
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| ID | 5188217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | - |
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| Start bp | 1525777 |
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| End bp | 1526442 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640591323 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_001272060 |
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| Protein GI | 148544690 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000000000764619 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGGTCAAA AGATCAATCC TAATGGTTTT CGTGTTGGGG TCATTCGTGA TTGGACTGCA
AAGTGGTACG CTGACAAGGA CTTTGCTGAT TACCTTAACG AAGACCTTCG AATCCGTAAG
TATATTGAAA AGCGACTTGC TGATGCCTCT GTATCAACCG TTGAAATTGA ACGTGCAGCT
AACCGCGTAA ACGTATCAAT TCATACTGCC AAGCCAGGAA TGGTTATTGG TAAAGGTGGT
TCAGAAGTTG AAGCACTTCG TAAAGAACTT AACAAATTAA CTGGTAAACG TGTTCACATT
AACATTGTGG AAATTAAGAA GCCAGATTTA GATGCTCACC TTGTTGGTGA GAGTATTGCA
CGGCAATTAG AAGCTCGTAT TGCTTTCCGT CGTGCTATGC GTGGAGCTAT GCAACGTGCT
ATGCGTGCTG GAGCTAAGGG TATTAAGACT CAAGTTGCTG GTCGTTTGAA CGGTGCAGAT
ATGTCACGGA TCGAATCATA CTCGGATGGT ACTGTTCCAT TGCATACACT CCGTGCTGAT
ATCGATTATT CTTGGGACGA AGCTAACACT ACATACGGTG TTCTTGGTGT AAAGACTTGG
ATTTACCGTG GTGAAGTACT TCCTACTAAG AAGAACTCAA ACAATGATGA ACAAGGAGGG
AAGTAA
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| Protein sequence | MGQKINPNGF RVGVIRDWTA KWYADKDFAD YLNEDLRIRK YIEKRLADAS VSTVEIERAA
NRVNVSIHTA KPGMVIGKGG SEVEALRKEL NKLTGKRVHI NIVEIKKPDL DAHLVGESIA
RQLEARIAFR RAMRGAMQRA MRAGAKGIKT QVAGRLNGAD MSRIESYSDG TVPLHTLRAD
IDYSWDEANT TYGVLGVKTW IYRGEVLPTK KNSNNDEQGG K
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