Gene Lreu_1468 details

Gene Information

• Locus tag: Lreu_1468
• Symbol: rplF
• ID: 5189893
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Lactobacillus reuteri DSM 20016
• Kingdom: Bacteria
• Replicon accession: NC_009513
• Strand: -
• Start bp: 1522301
• End bp: 1522837
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 640591314
• Product: 50S ribosomal protein L6
• Protein accession: YP_001272051
• Protein GI: 148544681
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.00000000000108957
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTCGTA TTGGTTACAA AGAAATTGAT TTGCCAAGTG GTGTTGAAAT TTCTCAAGAT 
GGTAATGTAG TTACTGTTAA AGGTCCTAAG GGTACGTTAT CTCGTGAAAT TTCACCATTA 
ATCAAAATGA CTATTGATGG TAACGTTGTA AAGTTTGATC GTGATGCTGA CACTAATAAG 
TTAAAGATGT TACACGGAAC TACTCGTGCT AATGTTAACA ACATGGTTGA AGGTGTTGTT 
GATGGTTACA AGAAAGTTCT TAAGCTTGTT GGTGTTGGTT ACCGTGCTCA ACTCAAAGGT 
AACAAGTTGA TTTTAACTGT TGGTTACTCA AACCCAGTTG AAATGGATAA GCCAGAAGAT 
GTTGAAATTA ATGTACCTGA CAATACTACT ATCGAATTAA GCTCAATTAA CAAGGAACAC 
CTTGGAAATT TTGCTGCTGA AGTTCGTGCT GTACGTTCAC CTGAACCATA CAAAGGTAAG 
GGTATTCGTT ACGAAAACGA ACACATTATC CGTAAGGAAG GTAAGACTGG TAAGTAA 

 

Protein sequence

MSRIGYKEID LPSGVEISQD GNVVTVKGPK GTLSREISPL IKMTIDGNVV KFDRDADTNK 
LKMLHGTTRA NVNNMVEGVV DGYKKVLKLV GVGYRAQLKG NKLILTVGYS NPVEMDKPED 
VEINVPDNTT IELSSINKEH LGNFAAEVRA VRSPEPYKGK GIRYENEHII RKEGKTGK