Gene Lreu_1466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1466 
SymbolrpsE 
ID5188694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1521351 
End bp1521860 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content44% 
IMG OID640591312 
Product30S ribosomal protein S5 
Protein accessionYP_001272049 
Protein GI148544679 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0098] Ribosomal protein S5 
TIGRFAM ID[TIGR01021] ribosomal protein S5, bacterial/organelle type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000130874 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATCAT CAGAATTCAT TGATCCAGCA AAGTTGGATT TAGACGATCA AGTTGTAGCC 
ATCAACCGGA TTACTAAGGT TGTAAAGGGT GGACGTCGTA TGCGTTTCGC TGCTTTAGTA
ATTGTTGGTG ACCGTAAAGG TCATGTTGGC TTTGGTACTG GTAAGGCTCA AGAAGTTCCA
GAAGCTATTC GTAAAGCTCA AGCAGCTGCT GAAAAGAACT TGATTACTGT TCCTATCGTT
GGAACTACTA TTCCACACGA AGTTATTGGT GTATACGGCG GTGGAAAGAT CATGTTAAAG
CCAGCTGTTG AAGGTTCTGG AGTTGCTGCC GGTGGTGCGG TTCGTAATGT TATGGACCTT
GCCGGTGTTG CGGACGTTAC TTCTAAACGT CTTGGCTCTA ACACACCTGT TAACGTTGTT
CGTGCAACGT TTGAAGGTTT GAAGCAATTA AAGAACGCTG AAGAAGTTGC AAAGTTACGT
GGTGTTTCAG TAGACCACTT AGCAGAATAA
 
Protein sequence
MASSEFIDPA KLDLDDQVVA INRITKVVKG GRRMRFAALV IVGDRKGHVG FGTGKAQEVP 
EAIRKAQAAA EKNLITVPIV GTTIPHEVIG VYGGGKIMLK PAVEGSGVAA GGAVRNVMDL
AGVADVTSKR LGSNTPVNVV RATFEGLKQL KNAEEVAKLR GVSVDHLAE