Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1466 |
Symbol | rpsE |
ID | 5188694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 1521351 |
End bp | 1521860 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640591312 |
Product | 30S ribosomal protein S5 |
Protein accession | YP_001272049 |
Protein GI | 148544679 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0098] Ribosomal protein S5 |
TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000000130874 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATCAT CAGAATTCAT TGATCCAGCA AAGTTGGATT TAGACGATCA AGTTGTAGCC ATCAACCGGA TTACTAAGGT TGTAAAGGGT GGACGTCGTA TGCGTTTCGC TGCTTTAGTA ATTGTTGGTG ACCGTAAAGG TCATGTTGGC TTTGGTACTG GTAAGGCTCA AGAAGTTCCA GAAGCTATTC GTAAAGCTCA AGCAGCTGCT GAAAAGAACT TGATTACTGT TCCTATCGTT GGAACTACTA TTCCACACGA AGTTATTGGT GTATACGGCG GTGGAAAGAT CATGTTAAAG CCAGCTGTTG AAGGTTCTGG AGTTGCTGCC GGTGGTGCGG TTCGTAATGT TATGGACCTT GCCGGTGTTG CGGACGTTAC TTCTAAACGT CTTGGCTCTA ACACACCTGT TAACGTTGTT CGTGCAACGT TTGAAGGTTT GAAGCAATTA AAGAACGCTG AAGAAGTTGC AAAGTTACGT GGTGTTTCAG TAGACCACTT AGCAGAATAA
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Protein sequence | MASSEFIDPA KLDLDDQVVA INRITKVVKG GRRMRFAALV IVGDRKGHVG FGTGKAQEVP EAIRKAQAAA EKNLITVPIV GTTIPHEVIG VYGGGKIMLK PAVEGSGVAA GGAVRNVMDL AGVADVTSKR LGSNTPVNVV RATFEGLKQL KNAEEVAKLR GVSVDHLAE
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