Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1455 |
Symbol | |
ID | 5188225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 1514886 |
End bp | 1515713 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640591301 |
Product | ABC transporter related |
Protein accession | YP_001272038 |
Protein GI | 148544668 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1122] ABC-type cobalt transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00000125166 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACTGGAA TAAAAATTCG AAAGCTTGTA TTTACATATC CAGACAGTAA ATACCCCGTT TTAAACAATA TCAATCTAGA TTTTGAACCA TTTTCTTGGA CAGCAATTAT TGGTCATAAT GGTAGCGGAA AGAGTACATT AGCCCGATTA ATTGATGGAT TACTCAGTCC TACTGCGGGA TCGATTGAAG TTGACGGAAT TCAAGTTAAC GAAAGTTCTT TAGGTCAGAT TCACCAGCAA ATCGGATTCG TTTTTCAAAA CCCTGAAAAT CAGTTTGTAG GAGCAACAGT TGCTGACGAT GTTGCATTCG GACTTGAAAA CCGACAAGTA GCTCAAAATG AAATGGGGGA AAAGATTGAT AAAGCTTTAA AGATGGTGGG AATGAGTGAT TATAAAAACA CAGCTCCTAT TAATCTCTCA GGAGGACAAA AGCAACGGGT AGCACTTGCA GGAATCCTTG CATTAATGCC TAAGATAATA ATCCTTGATG AGGCCACTAG TATGCTTGAT CCTTTAGCAC GACAAGAAAT TTTGTCTTTA TTGCAAAGAT TAAAAAATGA ATATAATCTT TCAATTATTT CGATTACGCA TGATCTTAAA GAAATTGAGC TAGCAGATAA AATAATTGTG TTAAATGATT CGCAAGTTGT AAAGCAAGGT ACTCCATCCG AAATTCTTAA AGATAAAGAA TTATTACTTG AAATTGGAGT AGGAGTTCCT GCGAGTCAGC AACTGCAGAA ATTATTGGTT GAACGAGGAA TTAATATTCC AAATAGATAT TTAAATTTAG AGGAGCTAAA AAATTGGCTA AAGCAGCAAT TACAGTAA
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Protein sequence | MTGIKIRKLV FTYPDSKYPV LNNINLDFEP FSWTAIIGHN GSGKSTLARL IDGLLSPTAG SIEVDGIQVN ESSLGQIHQQ IGFVFQNPEN QFVGATVADD VAFGLENRQV AQNEMGEKID KALKMVGMSD YKNTAPINLS GGQKQRVALA GILALMPKII ILDEATSMLD PLARQEILSL LQRLKNEYNL SIISITHDLK EIELADKIIV LNDSQVVKQG TPSEILKDKE LLLEIGVGVP ASQQLQKLLV ERGINIPNRY LNLEELKNWL KQQLQ
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