| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1444 |
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| Symbol | |
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| ID | 5188720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | - |
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| Start bp | 1503601 |
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| End bp | 1505643 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640591290 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_001272027 |
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| Protein GI | 148544657 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0179686 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAAA AACAGACGCC AGTAAAAGAA TTAACCCTTC AAGAAGCTCA AGATGAGATT
AAGCCATTAC GAGCAAAATT GACTAAGTGG GGAAAAGAAT ATTATGAACA AGACAATCCA
ACTGTAGAGG ATCATGTGTA TGATCGTGCT TATCAGCGAT TAGTACAGCT GGAAGAACAA
TTTCCCCAAT TGGTCTCTGC TGATTCGCCA ACCCAACGAG TAGGAGGAGC AACAGAAAGC
CAATTAACAA AAGTTCGGCA CGAAATTCCG ATGTTATCGA TGGGGGATGT CTTTTCGATT
GAAGAATTGA TGGACTTTAA CCAACGACAA CAGGAAAATC GGGATGTCGA AGTTGAGCCC
GAATATAATC TCGAACTAAA AATCGATGGC CTTTCTCTTT CACTTGTTTA CGAGAATGGA
AAGTTAGTTC AAGGTTCTAC GCGTGGCAAT GGAACGATTG GTGAAGATGT TACTGCTAAT
GTCCGAACTA TCAAGTCAGT TCCCGCAGAA TTGCCAGAAC CATTATCGAT CGAGGTTCGG
GGCGAATGTT ATATGCCAAA AGCGGCTTTT GCAAAGTTAA ATGCTAAACG CGAAGCAGAA
GGATTGCCGG TTTTTGCTAA TCCCCGGAAT GCAGCAGCCG GAAGTTTGCG GCAACTAGAT
CCGAAAGTAA CGGCGCAGCG TGAACTAGAT ACATTTATGT ATTATGTTCC TGAATATCAA
AAGATAGGCG TTAAGACCCA AGCGGAAGCA CTTGATCGTA TGCGAGAATT AGGTTTTAAT
GTTAATCCTA ATAATCGGGT TGTTCATAAC CGTGATGAAA TTGAGAAGTA TATTGAAGAA
TATACAGCTC AACGAGACAA GCTCACTTAC GGGATCGATG GAATTGTTGA AAAAGTAAAC
GACCTTGATA CGGAAGTTGC CCTTGGGAAT ACAGTTAAGG TGCCACGCTG GGAAATTGCT
TATAAATTCC CTCCCGAAGA GCAAGCAACG ATTGTCCGTG ATATTGTCTG GACTGTCGGT
CGGACCGGCA ATGTAACGCC AACAGCAGTT ATGGACCCAG TTCAATTGGC GGGTACAACA
GTTAGTCGAG CTTCTTTGCA TAATCCTGAT TACTTGCGTG AAAAAGATAT TCGAATTGGT
GATACTGTTT ACCTGCATAA AGCGGGTGAC ATTATTCCTG AAATTTCAAA AGTAGATCTA
ACTAAACGTC CTGCAGATTC AGTTGAATAT GAGATTCCAA CGAAGTGTCC GGTCTGTGGC
TCGGAATTAG TTCATCTTGA TGGTGAAGTT GCGTTACGCT GTATTAATCC AATGTGTCCA
GCACAGATTA AAGAAGGCTT AGCACATTTC GCTTCTCGGA ATGCCATGAA TATCGATGGG
CTTGGTCCTA GAATTATTGA ACAGCTGTGG GATAAAGAAT TAATTCATGA TGTTGCCGGT
TTGTATCGGC TTAATCATGA TCAATTATTA ACTTTAGATA AATTTGGTGA GAAATCGACC
GCTAACCTAT TGACATCGAT CGATAATAGT CGTAATAATT CTGTCGAGCG CTTATTATTT
GGTCTTGGAA TTCGTCATGT AGGTGCAAAG GCTGCTCGAA TTATCATGGA ACATTTTGGT
GACCTTGATA GCTTAATGAA GGCTGATGCC GATGAAATTT CTGCGATTAG TGGAATTGGG
CCAACAATTG GCGAAAGTAT CGTAACTTAT TTTGCTAATC AACAGGTTGT TAAATTAATT
GACGAATTAC GAGAAGTTGG GGTAAACTTT GCTTATCTTG GCTCACGGTC AAATGCTAAT
CCTGATAGCG AATGGAATGG TCGGCGAGTA GTACTGACTG GTAAGCTAAC TGAAATGACT
CGTGGGGAAG CAAAATCATG GCTTGAAAAC CACGGGGCTA AGGTAACCGA AAGTGTCTCA
AAGAAAACAG ATATTGTCAT TGCTGGGGCT GATGCTGGTA GTAAGCTAAC AAAAGCTCAA
AACTTGGGTA TTGATGTATG GAATGAACAG CAATTCAGCC AAGCAATGAA GGAGGAACAG
TAA
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| Protein sequence | MSEKQTPVKE LTLQEAQDEI KPLRAKLTKW GKEYYEQDNP TVEDHVYDRA YQRLVQLEEQ
FPQLVSADSP TQRVGGATES QLTKVRHEIP MLSMGDVFSI EELMDFNQRQ QENRDVEVEP
EYNLELKIDG LSLSLVYENG KLVQGSTRGN GTIGEDVTAN VRTIKSVPAE LPEPLSIEVR
GECYMPKAAF AKLNAKREAE GLPVFANPRN AAAGSLRQLD PKVTAQRELD TFMYYVPEYQ
KIGVKTQAEA LDRMRELGFN VNPNNRVVHN RDEIEKYIEE YTAQRDKLTY GIDGIVEKVN
DLDTEVALGN TVKVPRWEIA YKFPPEEQAT IVRDIVWTVG RTGNVTPTAV MDPVQLAGTT
VSRASLHNPD YLREKDIRIG DTVYLHKAGD IIPEISKVDL TKRPADSVEY EIPTKCPVCG
SELVHLDGEV ALRCINPMCP AQIKEGLAHF ASRNAMNIDG LGPRIIEQLW DKELIHDVAG
LYRLNHDQLL TLDKFGEKST ANLLTSIDNS RNNSVERLLF GLGIRHVGAK AARIIMEHFG
DLDSLMKADA DEISAISGIG PTIGESIVTY FANQQVVKLI DELREVGVNF AYLGSRSNAN
PDSEWNGRRV VLTGKLTEMT RGEAKSWLEN HGAKVTESVS KKTDIVIAGA DAGSKLTKAQ
NLGIDVWNEQ QFSQAMKEEQ
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