| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1438 |
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| Symbol | |
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| ID | 5188659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | - |
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| Start bp | 1496226 |
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| End bp | 1497605 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640591284 |
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| Product | RNA methyltransferase |
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| Protein accession | YP_001272021 |
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| Protein GI | 148544651 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAACTAA ACATTCCAGT ACATAAAAAT GAAGAATATC CCGCAAAAGT AGTGGATTTA
TCTTACGAAG GCAATGGGGT CGTTAAGATT GATGATTTTC CCGTCTTTGT TCCTAATGCC
CTTCCTGGTG AAGAGATTAC GGTAAAGATC ACCAAAGTAA CCAGCCACTT TGCATGGGGA
CGAGTAATGG ACTGGCAGAC GAAGAGTCCA GACCGCGTTG ATGTTAAGGA TAAAAAGTAC
ATTCAAACGG GAATCGCTCC ACTTGGTCAT TTGAAATACG ATGCTCAACT GAAATTTAAG
CAACATCAAA TTCAAGAATT ATTGGCTAAA GCCCACTTAG ATGAGATTGA AGTTTTGCCA
ACGATGGGGA TGGAAAAGCC TTATCATTAC CGCAACAAGG CCCAAGTACC AGTAAAAATG
GTCCACGGTC AATTAGAAAC CGGTTTTTAT AAGCGGGGGA GCCACAATTT AGTACCCATT
GAAGATTTCT ATATCCAGGA TCCAGAAATT GATAAGGCCA TTGTGGTTGT CCGTGACTTA
TTACGACAAT ACCACATTAC GCCATATGAT GAACAAACTG GTAAGGGCGT GATTCGCACA
GTAATGGTTC GGCGGGGATA CTACAGCCAT GAAATGATGG TAGTCTTAGT CACGAATACG
AAGCGGCTGC CAATGGAAAA GCAAATCGTC GACGGAATCG TTGCCGGAGT GCCAGAAGTA
AAAAGTATTG TGCAAAATAT CAATGATAAG CGAACGAACC GCTTGCTCGG CAATAAGAAT
AAAACGTTAT GGGGTGCTGA TGAAATTCAT GATCAGCTCC TCGGGATTGA TTTTGCAATT
TCACCATTAT CCTTCTACCA GGTTAATCCG CAACAGACTG AACGCCTTTA CCAAACAGCC
ATCGACAATG CAGGCTTGGA CGGTAATCAA ACCGTCATTG ATGCCTATTG TGGAATTGGC
ACGATTTCCC TGGCAGTAGC TAAGCACGCT AAGCAAGTTT ACGGGGTCGA AATTGTTCCA
GCGGCGATTG AAGATGCCAA ACATAATGCT AAACGGAATG GTATTAAGAA CGCCAAATTT
GTTGTTGGTA AGGCGGAAGA ACAATTTGCT AAGTGGCAAG CAGAAGGGCT CAAACCAGAT
GTTGTCATCG TTGATCCACC ACGGAAGGGC TTGGCTGAAT CATTGATTGA AGCTACTGGT
AAGATGGGAC CGAAGAAAGT GATTTATGTT TCCTGCAACC CAGCTACTTT AGTTCGTGAT
ATCAAGCGGT TCGCTGACCA AGGCTACCAT GTAACAAAGC CAATTCAGCC AGTAGACCAG
TTCCCACAGA CGACGCATGT TGAGTCAGTA ACGGTGCTGG AACGAGCACA AAACGATTAA
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| Protein sequence | MKLNIPVHKN EEYPAKVVDL SYEGNGVVKI DDFPVFVPNA LPGEEITVKI TKVTSHFAWG
RVMDWQTKSP DRVDVKDKKY IQTGIAPLGH LKYDAQLKFK QHQIQELLAK AHLDEIEVLP
TMGMEKPYHY RNKAQVPVKM VHGQLETGFY KRGSHNLVPI EDFYIQDPEI DKAIVVVRDL
LRQYHITPYD EQTGKGVIRT VMVRRGYYSH EMMVVLVTNT KRLPMEKQIV DGIVAGVPEV
KSIVQNINDK RTNRLLGNKN KTLWGADEIH DQLLGIDFAI SPLSFYQVNP QQTERLYQTA
IDNAGLDGNQ TVIDAYCGIG TISLAVAKHA KQVYGVEIVP AAIEDAKHNA KRNGIKNAKF
VVGKAEEQFA KWQAEGLKPD VVIVDPPRKG LAESLIEATG KMGPKKVIYV SCNPATLVRD
IKRFADQGYH VTKPIQPVDQ FPQTTHVESV TVLERAQND
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