| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1432 |
|---|
| Symbol | |
|---|
| ID | 5188550 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | - |
|---|
| Start bp | 1485569 |
|---|
| End bp | 1488895 |
|---|
| Gene Length | 3327 bp |
|---|
| Protein Length | 1108 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 640591278 |
|---|
| Product | type III restriction protein, res subunit |
|---|
| Protein accession | YP_001272015 |
|---|
| Protein GI | 148544645 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG4096] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACTAACT TTGATTATTT ACTAGAAGAA CCACAATTTA AAGATTTCGT GCAAATAGCA
ATAGCAGCTG AAAAAGTAGC CGTTATTGAT CCTGCAACAG CAGTAATTGA CTGTCGACGT
GCAATGGAAT TAGCGGTTAA GTGGATGTAT TCAGTTGACT CAGACTTAAG AACTCCCTAT
CAGGATAAAT TAGTAACCTT AATCAATACT CTAGATTTTA AGGATATTGT TGATCCTAAT
ACTTGGCAAG GCCTAGAATT AATTCGTCGT TTAGGAAATA TTGCTGTACA CACTAATAGA
AAAGTATCTC TAGATGAAGC TATTTTATGT TTAAAAGCTT TATTTAGCTT TTTTGATATG
CTTGATTATT GTTATGGAAG CAATTATCAA AAGAAAGATT TTGACAAGTC GATTGTTGGG
AATTATCGTC TGGAGTTTGT TCCTAAAGTC TCTCCAATGG AAGAGTCAAC AATTTCTCTC
GAAAAACTTA CGAAAAAGAA CAAACCTTTA CAGGAATCTT TAACTGCGCA AAGAAAAGTA
CAAGGAAAGA GCTATACTCC TAAACCATTT GGAATCTCAG AGTTTAAAAC TCGTAAAATT
TATATTGATA CTATGCTAGC TGAAGTAGGT TGGATTGAGG GCCAAAATTG GTTAAACGAA
GTAGAACTTA AAGGAATGCC TAACAAAGCT GGTACTGGAT ATGCCGATTA CGTCTTATAT
GATGATGCGC ATCAACCTCT TGCAGTTATT GAGGCAAAGA AAACTTGTAA AGATGTAGCA
GTTGGGCGCC AACAAGCAAA ACTATATGCG GATATATTAG AGAATAAGTA TGGACGTAGA
CCAGTTATAT TTTTAAGTAA TGGATTTGAA ACACGAATTA TTGATAATCA ATACCCTGAG
AGACAAGTTT CATCAATTTA TTCTAAGCGT GATTTAGAAA AGTTGTTTAA TTTGCAAAAA
GTACGCCAAC CTTTAACGAA TATTGTAGTA GATGATAATA TTGCGGGACG TTATTATCAA
AAGGCTGCCA TTCAAGCTGT TTGCGAAAGT TTTTCAAAAG AAAATAGACG TAAAGCTTTA
TTAGTCATGG CGACAGGATC CGGTAAAACA AGAACTGCAG TTGGATTAGT TAAAGTTCTT
TTAAACGCTG GTTGGATTAA ACATATTTTA TTTTTAGCCG ATAGAGATGC TTTAGTGACA
CAGGCTAAAA GGAGCTTTGT CAATTTACTA CCTGATCTTT CCGTAACTAA TTTAGTTGAA
GATAAGAAAA ATTATAACGC TCGATGTGTT TTTTCTACCT ATGCAACAAT GATGAATGTC
ATTGATACAG CAATAGATGA CGAAAAGCAA AAACTGTATA CAGCAGGACA TTTTGACTTA
ATTATTGTCG ATGAGGCTCA CCGATCAATC TATAATAAAT ATAGAAATAT CTTTACTTAC
TTTGATGCAC CATTAGTTGG GCTAACTGCT ACCCCTAAAG ATGATATTGA TAAAAATACC
TATTCTATTT TTAACTTGGA AGATGGAGTG CCCACTTATG GGTATGATCT AGCAGAAGCT
GTTAAAGATA AGTGTTTAGT ACCCTACAGA TCAATAGAGA CCCGCTTAAA ATTTATGGAA
AAGGGTATTA ATTATGACGA TTTAACTGAT CAAGAAAAGG AAGAATATGA GGAAACTTTC
ACAGATGAAG ATGGTGAGCT GCCAAAGAAG ATTGAATCAA GAAAGTTGAA TAAGTGGTTA
TTTAATAAAG ACACTATTCG CAAAGCTTTG AATATTTTAA TGAGTCAGGG ACTAAAGATT
AATTATGGCG AAAGAATAGG TAAAACTATT ATCTTTGCTA AGAATCATCG CCATGCTGAG
GAAATTCTGA AAGTTTTTAA TGAAGAATAT CCTCAGTTTT GTAAAAATGG TCAACCTTAT
GCAACCGTAA TTGATAATTA TACTAATTAC GCACAAAGTG CAATTGATGA ATTTTCAGAT
CCAAATAAAT TACCACAAAT TGCTATTTCC GTGGATATGT TGGACACAGG AATTGATGTA
CCAGAATGTT TAAATTTAGT ATTTTTCAAA AAAGTAATGA GTAAGGCGAA ATTCTTCCAG
ATGATTGGAA GAGGAACACG TTTATGTCCA AATTTGTTAG ATGGAAAAGA TAAAGAAGAA
TTTTACATTT TTGATTTTTG CGATAACTTT CAATTTTTCC GTATGAAAAA GGGACGTGAA
GCGGGGGCCC AAGAAACGTT ACAAAGTGCT TTATTCAATT TGAAAATGAA ATTAGTACGG
AAATTACAAG AAGCCCCATA TCAAACAGAA GATTTTAAGC AGTATCGAAA CTTTTTAGTT
GAAGATTTAT CTAAAAAAGT TAAAGAATTA AATAGAAAAA ATTTTGCTGT TAAACAACAT
CTTGCCTATG TTGATAAATT TTCTCAAATA GATAATTACA ATAACTTAAC TTATGAGGAC
ATTGTAAATG TTCAAAAAGA GTTAGCACCT CTAATTCTTC CGGATAATGA TGAACCAAAT
GCCCTACGCT TTGATGCTTT AGTCTATAAA ATGGAACTGG CAAAAATGTC ACAAGAATCC
TATGGACGAT TAAAAGTAGA TCTCTGTAAT AAAATTTCTA AATTATCTGA TTTAATGACT
ATCCCACAGA TTAAAGCAAA AGCCGACTTA ATTAAAGTTA TGTCAGAGTC AGAATATGTT
GAATCTGCAA ATGTTCAAGA TTTAGAGCAT ATCCGTCAAA ATATACGGGA CTTAATTCAA
TATCTTCCAA AAAAGGGAGT AGTGTATTAT ACAAATTTCA CTGATAGTAT ATTAGATTCA
ACTGTTCATG AAGCTGAACT TGAAACTTCT ACTTTGAAAA ACTACAAAGC AGAAGCAGAA
TTTTATATTA AGCAACATCA AAGTGAAAAT ATAATGTGTA AAATTAAAGA TAATGCACCT
TTAAATAGCA GTGATATAAA AGAGCTCGAG AATATTCTAT GGCAAAAACT TGGAAGTAAA
GAAGAGTATC AAAAAGAAAT AGGAAATAAA ACTCCTGGTG AATTTGTTCG TAGTATTGTT
GGTTTAGATA TGAAAGCTGC CAAAGAAGCT TTTAATAAAT ATTTAGATAC AGTTTCACTT
AATAAACAGC AGATATATTT TATAAATGAA ATTATAGAGT ATATTGTTAA AAATGGTACA
TTAACTGATA TGCATGTTTT ACAGGAATCT CCATTTACAA ATCAAGGATC AATTTCAGAA
CTCTTTGAAT CAGATAAAAA TATTTGGTTC AAAGTAAAAA GAGCAATTGA TGAAATTAAT
AGTAATGCTG GAGTTGGCGT AGCTTAA
|
|---|
| Protein sequence | MTNFDYLLEE PQFKDFVQIA IAAEKVAVID PATAVIDCRR AMELAVKWMY SVDSDLRTPY
QDKLVTLINT LDFKDIVDPN TWQGLELIRR LGNIAVHTNR KVSLDEAILC LKALFSFFDM
LDYCYGSNYQ KKDFDKSIVG NYRLEFVPKV SPMEESTISL EKLTKKNKPL QESLTAQRKV
QGKSYTPKPF GISEFKTRKI YIDTMLAEVG WIEGQNWLNE VELKGMPNKA GTGYADYVLY
DDAHQPLAVI EAKKTCKDVA VGRQQAKLYA DILENKYGRR PVIFLSNGFE TRIIDNQYPE
RQVSSIYSKR DLEKLFNLQK VRQPLTNIVV DDNIAGRYYQ KAAIQAVCES FSKENRRKAL
LVMATGSGKT RTAVGLVKVL LNAGWIKHIL FLADRDALVT QAKRSFVNLL PDLSVTNLVE
DKKNYNARCV FSTYATMMNV IDTAIDDEKQ KLYTAGHFDL IIVDEAHRSI YNKYRNIFTY
FDAPLVGLTA TPKDDIDKNT YSIFNLEDGV PTYGYDLAEA VKDKCLVPYR SIETRLKFME
KGINYDDLTD QEKEEYEETF TDEDGELPKK IESRKLNKWL FNKDTIRKAL NILMSQGLKI
NYGERIGKTI IFAKNHRHAE EILKVFNEEY PQFCKNGQPY ATVIDNYTNY AQSAIDEFSD
PNKLPQIAIS VDMLDTGIDV PECLNLVFFK KVMSKAKFFQ MIGRGTRLCP NLLDGKDKEE
FYIFDFCDNF QFFRMKKGRE AGAQETLQSA LFNLKMKLVR KLQEAPYQTE DFKQYRNFLV
EDLSKKVKEL NRKNFAVKQH LAYVDKFSQI DNYNNLTYED IVNVQKELAP LILPDNDEPN
ALRFDALVYK MELAKMSQES YGRLKVDLCN KISKLSDLMT IPQIKAKADL IKVMSESEYV
ESANVQDLEH IRQNIRDLIQ YLPKKGVVYY TNFTDSILDS TVHEAELETS TLKNYKAEAE
FYIKQHQSEN IMCKIKDNAP LNSSDIKELE NILWQKLGSK EEYQKEIGNK TPGEFVRSIV
GLDMKAAKEA FNKYLDTVSL NKQQIYFINE IIEYIVKNGT LTDMHVLQES PFTNQGSISE
LFESDKNIWF KVKRAIDEIN SNAGVGVA
|
|---|
| |