Gene Lreu_1398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1398 
Symbol 
ID5188513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1456802 
End bp1457509 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content38% 
IMG OID640591247 
Producthypothetical protein 
Protein accessionYP_001271984 
Protein GI148544614 
COG category[R] General function prediction only 
COG ID[COG0670] Integral membrane protein, interacts with FtsH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAATT TTTCACCAAA TCGTCGAAAC GTTGTTGATA TTACCGACTT AAATAAGTTT 
TTAACAAAAA TGTATGGTTT AATGACCCTA GCAGTATTGC TTTCTGCCTT AACTGCTTGG
CTCGTAATGA CTGTTTTCGC TCAGCAATTT ACTGCTTTTA TGGTCAATAA CCGCTGGGGA
ATGTGGTTAA TTATCCTCTT GCCAATCATC CTGACGTTGG GGATTAATTT TAATGCTACT
CGCAGCCCTG GCCTTTGTCT GTTCCTATTA ATTTTAACAG CAATCGTCTA CGGAATTACC
TTTGCTTTTA TTGCAGGTGC TTATGCTGGC ACTGATATTG CAACAGCTTT CGTTTCCTCA
GCGAGTGTAT TCTTAACAAT GGCGATTATT GGTACTTTTT CTCATCGTGA TTTTACGCGA
ATTGGTTCTT ATGCCAGTGC AGCCTTAATT GGCTTGATCA TCGCCATGCT GGTTAACTTT
TTTGTCCAAA GCCCAATGAT TAATTATCTG CTTTCGATCG TTGCCGTAAT CATTTTTACA
GCGTTAACTG CTTGGGATGC ACAACGAATG AAAAATATCT ATATCGAATG CAATGGTCAA
GTCTCATCCA ATGGACTGGC TGTTCTTGGC GCTTTACAGC TTTACCTTGA TTTTATTAAT
CTCTTTATTA GCTTCTTAGA CATTTTTGGA TCAAGCAATG ACAGATAA
 
Protein sequence
MDNFSPNRRN VVDITDLNKF LTKMYGLMTL AVLLSALTAW LVMTVFAQQF TAFMVNNRWG 
MWLIILLPII LTLGINFNAT RSPGLCLFLL ILTAIVYGIT FAFIAGAYAG TDIATAFVSS
ASVFLTMAII GTFSHRDFTR IGSYASAALI GLIIAMLVNF FVQSPMINYL LSIVAVIIFT
ALTAWDAQRM KNIYIECNGQ VSSNGLAVLG ALQLYLDFIN LFISFLDIFG SSNDR