Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1398 |
Symbol | |
ID | 5188513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 1456802 |
End bp | 1457509 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640591247 |
Product | hypothetical protein |
Protein accession | YP_001271984 |
Protein GI | 148544614 |
COG category | [R] General function prediction only |
COG ID | [COG0670] Integral membrane protein, interacts with FtsH |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 60 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAATT TTTCACCAAA TCGTCGAAAC GTTGTTGATA TTACCGACTT AAATAAGTTT TTAACAAAAA TGTATGGTTT AATGACCCTA GCAGTATTGC TTTCTGCCTT AACTGCTTGG CTCGTAATGA CTGTTTTCGC TCAGCAATTT ACTGCTTTTA TGGTCAATAA CCGCTGGGGA ATGTGGTTAA TTATCCTCTT GCCAATCATC CTGACGTTGG GGATTAATTT TAATGCTACT CGCAGCCCTG GCCTTTGTCT GTTCCTATTA ATTTTAACAG CAATCGTCTA CGGAATTACC TTTGCTTTTA TTGCAGGTGC TTATGCTGGC ACTGATATTG CAACAGCTTT CGTTTCCTCA GCGAGTGTAT TCTTAACAAT GGCGATTATT GGTACTTTTT CTCATCGTGA TTTTACGCGA ATTGGTTCTT ATGCCAGTGC AGCCTTAATT GGCTTGATCA TCGCCATGCT GGTTAACTTT TTTGTCCAAA GCCCAATGAT TAATTATCTG CTTTCGATCG TTGCCGTAAT CATTTTTACA GCGTTAACTG CTTGGGATGC ACAACGAATG AAAAATATCT ATATCGAATG CAATGGTCAA GTCTCATCCA ATGGACTGGC TGTTCTTGGC GCTTTACAGC TTTACCTTGA TTTTATTAAT CTCTTTATTA GCTTCTTAGA CATTTTTGGA TCAAGCAATG ACAGATAA
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Protein sequence | MDNFSPNRRN VVDITDLNKF LTKMYGLMTL AVLLSALTAW LVMTVFAQQF TAFMVNNRWG MWLIILLPII LTLGINFNAT RSPGLCLFLL ILTAIVYGIT FAFIAGAYAG TDIATAFVSS ASVFLTMAII GTFSHRDFTR IGSYASAALI GLIIAMLVNF FVQSPMINYL LSIVAVIIFT ALTAWDAQRM KNIYIECNGQ VSSNGLAVLG ALQLYLDFIN LFISFLDIFG SSNDR
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