| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1394 |
|---|
| Symbol | |
|---|
| ID | 5188657 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | - |
|---|
| Start bp | 1452493 |
|---|
| End bp | 1453416 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640591243 |
|---|
| Product | malate dehydrogenase (NAD) |
|---|
| Protein accession | YP_001271980 |
|---|
| Protein GI | 148544610 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0039] Malate/lactate dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 60 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAAGA TTGGAATTAT TGGCCTCGGT CATGTGGGTG AAATGCTAGC CAACCAATTA
GTAATGAACG GAAAAGTTGA TGAATTAGTT TTGATTGATG AAAAAGATCA ACTAGCTATT
GCAATTCAGG CCGATTTAAA TGATGCCCAA ACGGTTTTAG CGACCCACAC AAAAATAATT
ATTCAAGATT ACGCTGCCTT AGCCGATGCG GATATCCTTA TTACCGCCTT TGGAAAGAGT
GCTTTGATGA AGCAACAACC AATGGCTGAG CTTGAGACTA GCTATCAGCA GGCCTTACAA
GTTGGTAATA AGATTTTTAA GAGTGATTTT AGTGGGATCT TAATTAACCT TACTAATCCT
AATGAGGCAA TTACTGCTGT TCTCCAGCAA AAAGTTGGCT TGCCGCAAAA GCAAGTAATT
GGGATTGGCA CGGTTGTTGA AACTGCGCGC CTTTATCGGG CAATTGCAGA AGCCGCAAAG
GTCGCTGCTG CCAATGTAAC TGGCTTTGTC TATGGTCAAC ACGATGGTCA CCAGGTATTT
GCTTGGTCAA CTGTTCGTGT GAATGGACAA CCCTTAACTG CGGCAATCAA TGGTCATCAC
TTAGATCAAA GTCAGCTTAA AATTAAGGCG AACCTTAGTA ATTGGTACAC TCTCGATGGA
TTAGGGTATA ATGTTAGTGC TGTTACTGCT TGGACTCTCC GAATTATTAC GGCAATTTTT
GCGGATGAAC AATTAGCGTT GCCGGTTGCA ATTTATCAGC CGCAGTATTC AACTTACATC
AGTTTTCCAG CGTTAATTGG TCGGCAAGGG ATTGGCAACC TCCTCCTCTT AAAGCTTTAC
CCATTGGAAG AAGAGGAGAT TAAGAGTGCG GCAGCAACAA TTAAGCATCA ATTAGATTCT
CTAAAAAATA TTAAAGGGGA GTAG
|
|---|
| Protein sequence | MRKIGIIGLG HVGEMLANQL VMNGKVDELV LIDEKDQLAI AIQADLNDAQ TVLATHTKII
IQDYAALADA DILITAFGKS ALMKQQPMAE LETSYQQALQ VGNKIFKSDF SGILINLTNP
NEAITAVLQQ KVGLPQKQVI GIGTVVETAR LYRAIAEAAK VAAANVTGFV YGQHDGHQVF
AWSTVRVNGQ PLTAAINGHH LDQSQLKIKA NLSNWYTLDG LGYNVSAVTA WTLRIITAIF
ADEQLALPVA IYQPQYSTYI SFPALIGRQG IGNLLLLKLY PLEEEEIKSA AATIKHQLDS
LKNIKGE
|
|---|
| |