| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1381 |
|---|
| Symbol | |
|---|
| ID | 5188656 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | - |
|---|
| Start bp | 1439536 |
|---|
| End bp | 1440426 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640591229 |
|---|
| Product | putative ribonuclease BN |
|---|
| Protein accession | YP_001271967 |
|---|
| Protein GI | 148544597 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1295] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.528846 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAGG AATCGGGCAA GGGCAAGACT TTTATTGCGT TATTAATTCA ACATATTACA
ATGGCCCAGA TTTCAAGTTC TGCTGCTGTT CTAGCTTACT ATACCTTGCT ATCTATTTTT
CCTGCCGTGA TGGTAGTAGG AAATTTATTG CCGATGATTG GAATTGACGC TAAGACGATT
TTAGCCTACC TCTCAACTGC AATTCCTGAA TCGGTCTATG ATTTTATCCA GCCGTTGATC
TATGATTTCT TACGACGGGG GAGTGGTGGT GTTCTGACAA CCGGGGCCTT GATTGCTCTC
TGGTCGACCA GTCAGGGAAT TGCCGCTTTT CAACGCAGCG TTAACCATGC CTATGGGATT
GCGGAAAATC AGAATCCGGT GATGAACCGA ATCGTCTCAT TTGTTTGGAT GATTGTCCTC
TTAGTAATTA TCTTTATCAT CATTATTTTA TACGGTTTTG GGGAGCAGGT TCTTAAGAGT
ATTCAGCCAA TTTTTAATTT CCGGCGTGAT TACATTGCTA TCTTTAGCTC ATTAAGGTGG
CCGGTAACAT TTGGCGTCTT GTTTATTGCT CTTACACTCT TGTATTACTT TGTTCCTAAT
GCGAAGGTCC GGTTGCGCTA TGCACTTGCT GGTTCATTCT TGGCTTCATT GCTTTGGATG
GGATTATCAC GTTTATTCTC GTTCTATACC TTATTATTTG GTCACGGGGT AATTTCCTAC
AAGACAATTG GAGCTTTTAT TGCAATGATG GTATGGCTTG ACTTTTCTGG CTATATTATC
ATGCTGGGGG CGGCGCTAAA TGCTGCTTTG CAAGAATGTC ATGAAGGTGA ATTGCATGCC
AAGAAACACT TTTGGCAACT GGTAGAAAGA AAAAACAAAA ATGGAGGCTA G
|
|---|
| Protein sequence | MDKESGKGKT FIALLIQHIT MAQISSSAAV LAYYTLLSIF PAVMVVGNLL PMIGIDAKTI
LAYLSTAIPE SVYDFIQPLI YDFLRRGSGG VLTTGALIAL WSTSQGIAAF QRSVNHAYGI
AENQNPVMNR IVSFVWMIVL LVIIFIIIIL YGFGEQVLKS IQPIFNFRRD YIAIFSSLRW
PVTFGVLFIA LTLLYYFVPN AKVRLRYALA GSFLASLLWM GLSRLFSFYT LLFGHGVISY
KTIGAFIAMM VWLDFSGYII MLGAALNAAL QECHEGELHA KKHFWQLVER KNKNGG
|
|---|
| |