Gene Lreu_1372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1372 
Symbol 
ID5189334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand- 
Start bp1432493 
End bp1433122 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content34% 
IMG OID640591220 
Productlipopolysaccharide biosynthesis protein 
Protein accessionYP_001271958 
Protein GI148544588 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3944] Capsular polysaccharide biosynthesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.482281 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAGA AAAATTTCAA CGTAAAGAAT ATTTCAAAAG TTGTTTGGAA AAACGTATTC 
ATTATCCTTA TTACAACAAT AATATTTGGA TTAGGGGGCA ATTTATATGC AAAGCATAAA 
CAGCATACAA CCTATGAATC CGTTAGAAAT ATTATGACTA GTAGAGCATA TGATGGTGCT 
AATGCAAATG AAGAACTTCA AGCTGATATG AATCTCGGAA ATACATATGC AAAAATAATA 
GAAAGTAATG ATACTGCTGC TGCTGCTCGT AAGTATTTAT CAAAAGACTT ACGAAAGAAA 
TACAATGCAG AACAAATCTC ATCAATGGTA AATGCAGAAC CGATAATGCA AACTACAATT 
GTTAGAGTAA GTGCGAAGGC TAATACTGCA CACGATTCTG CGGCTGTTGT AAATGCCGTT 
GCTGAGGCAG CAGCTAAAAA GATTCCTCAA AGAGTAACCT CAGCAAATAA AATTTCCCTA 
TTCTCTAAGG CTGTGGCTGA TGAAGCCAAA AGTGATAGTT CTCCGTCAAT TAAAAAGCTT 
ACTTTATTAG GAGCAGCTGT TGGATTTTTA TTAGGTTTTA TCCTATCTTT CTCGGCTACT 
ACGTGGGTTT ATTTAAAAGC TAAAAAATAG
 
Protein sequence
MSEKNFNVKN ISKVVWKNVF IILITTIIFG LGGNLYAKHK QHTTYESVRN IMTSRAYDGA 
NANEELQADM NLGNTYAKII ESNDTAAAAR KYLSKDLRKK YNAEQISSMV NAEPIMQTTI 
VRVSAKANTA HDSAAVVNAV AEAAAKKIPQ RVTSANKISL FSKAVADEAK SDSSPSIKKL 
TLLGAAVGFL LGFILSFSAT TWVYLKAKK