Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1364 |
Symbol | |
ID | 5188191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 1421973 |
End bp | 1423235 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640591212 |
Product | NLP/P60 protein |
Protein accession | YP_001271950 |
Protein GI | 148544580 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.123178 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATTTG CCACAGTAGC TAGTATCGTT GGATTAGCTA CATCAGCAAA TGCAGATGAC GTAAACACTA CTACAACATC TACTGTACAA ACTACCCAAG TAGCTGAAGA AACTCCTGCT ACTAGCACTT CAGATGCAGC AAGTTCTGCT GTACAATCTA ATTCGGTAGA TGCCGCTGAA CAAACCACTA ATGTTGATAC AAATGTTGCT AGTCCGGCAG TTACACCAGT ACAGCCACAA GACACCCAGC AAAAAAATGG TTGGGTAAAT GAAAACAATG ACTGGACATA TTATCAAAAT GGTGAGGTAA CATCAGGACG TGACTATACT TATTTACCAA CAATCAACGG AGAAGGTAAT AGTTGGTACT TAGTTGATAA CGGTGTTGTT CAATCAGGAG TACAACAGTG GGCTGGTTCA TACTATGACT TTGATGCGAA CAATAATTAT CAACGTGTAG ACAATAATTA TGTACAATCC CAATGGGGAA TGTGGTACCT CTTTGGCAAT GATGGTCGTA TTCAAACGGG AGTACAGCAA TGGGCCGGTT CATACTATTA TTTTGATCCA AGTACTTACC TTCGTGTAGA TAATGATTAC CGTCAATCCC AATGGGGTGA CTGGTATCTC TTTGGCAATG ATGGTCGTAT TCAAACGGGA GTACAGCAAT GGGCTGGTTC ATACTATTAT TTTGATCCAA GTACTTACCT TCGTGTAGAT AATGATTACC GTCAATCCCA ATGGGGTGAC TGGTATCTCT TTGGCAATGA CGGACGGATT CTTTCAGGGC TTCAAAGTTG GAAAGGTCAG ACTTACTACT TTGACCCAAC TACTTTCAAG AAGGTAGTTA ATCAAGATGT AACGGTTAAT AACGTGAAAT ATCATTTAGA TGCTAATGGT ATTGCCAAAC AAGTGTCTAA TGTTGATGCT AAAGTTAACC GTGCATTATC CCAACGTGGT GTTCCTTACG TATGGGGAGG AAATACTCCG GCTGGCTTTG ATTGCTCTGG GTTAGTTCAA TGGGCTTATG GTTTAGGTTC AGCTTATCGA ACAACTTACC AGCAAGCTAC TTTAGGTGCT CATAAGCGTG ATGTAATGAA TGCTCCAAAG GGTTCATTAC TATTCTTTGG TAGTGATGGC GCTCCATATC ATGTAGCTAT TTCTCTTGGT AATGGTACTT ATGTTCACGC ACCAGAGCCA GGTGATGTTG TAAAGATTGG TTATTCAAAA TACTTCACAC CAAGTTTCTA CATCAATATG TAA
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Protein sequence | MAFATVASIV GLATSANADD VNTTTTSTVQ TTQVAEETPA TSTSDAASSA VQSNSVDAAE QTTNVDTNVA SPAVTPVQPQ DTQQKNGWVN ENNDWTYYQN GEVTSGRDYT YLPTINGEGN SWYLVDNGVV QSGVQQWAGS YYDFDANNNY QRVDNNYVQS QWGMWYLFGN DGRIQTGVQQ WAGSYYYFDP STYLRVDNDY RQSQWGDWYL FGNDGRIQTG VQQWAGSYYY FDPSTYLRVD NDYRQSQWGD WYLFGNDGRI LSGLQSWKGQ TYYFDPTTFK KVVNQDVTVN NVKYHLDANG IAKQVSNVDA KVNRALSQRG VPYVWGGNTP AGFDCSGLVQ WAYGLGSAYR TTYQQATLGA HKRDVMNAPK GSLLFFGSDG APYHVAISLG NGTYVHAPEP GDVVKIGYSK YFTPSFYINM
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