| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1349 |
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| Symbol | |
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| ID | 5189058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | - |
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| Start bp | 1403361 |
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| End bp | 1404734 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640591198 |
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| Product | RNA-directed DNA polymerase (Reverse transcriptase) |
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| Protein accession | YP_001271936 |
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| Protein GI | 148544566 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000323944 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGACAAT CGCAGAAAAC AGAACAACAA GCTGACCGCT TGTCGAGGAT AGGTTTGGAA
AACCGAAAGT ACACAAGGGC GCGTAGTACC GGTTATGGTG AAGGTAAAGG TATGAGTGTC
ACTATCCAAG ACCTGGTCTT GGATCGCAAT AACCTTAATC AGGCTTATTT GCGAGTTAAG
AGAAATAAAG GAGCAGCAGG CGTTGACGAT ATGACAGTCA ATGACCTTCT GCCATATCTC
AGAGAAAATA AGACGGAACT GATCGCTAGT TTGCGTGAGG GCAAGTATAA ACCAGCTCCA
GTCAAACGGG TAGAAATTCC GAAGCCTAAT GGTAGAGTAA GAAGACTTGG AATACCAACG
GTGGTGGACC GAATGGTTCA ACAAGCTGTA GCCCAAATTC TTACGCCTAT CTTTGAGCGT
GTTTTCTCTG ATAATAGCTT TGGCTTCCGT CCCCACCGTG GGGCCCATGA CGCTATTGAA
AAAGTAGTAG ATCTTTATAA TCAAGGTTAT CGAAGAGTTG CCGACTTAGA CCTAAAAGCC
TATTTTGATA ACGTTAATCA TGACTTGATG ATTAAGTATC TCCAACAATA TATTGATGAC
CCATGGACAC TAAGACTCAT TCGTAAGTTT CTAACTAGCG GAGTCTTAGA CCATGGGCTT
TTCGCTAAGA GTGAAAAAGG AACCCCACAA GGAGGGCCAT TGTCACCACT ACTGGCGAAC
ATCTATCTAA ATGAGTTGGA CAAAGAGTTG ACTAGACGTG GTCACCACTT TGTGCGCTAT
GCGGATGATT GTAACATCTA TGTTAAAAGT CAACGAGCCG GAGAACGAGT AATGCGAAGC
ATTACACAGT TTCTAGAAAA GCGCTTGAAA GTTAAAGTGA ATCCAGATAA AACCAAAGTC
GGTAGCCCGC TACGGTTGAA GTTTCTTGGC TTTTCGTTGG GTGTAGACCA CAATGGGGCC
TACGCCCGTC CAGCTAAACA ATCGCAACAG CGAGTAAAGA AAGCACTGAA GTTATTAACT
AAACGTAATC GTGGAATATC TCTGACAAGA ATGTTTGAAG AAATTCATCG AAAAATGCGT
GGGTGGCTTC AGTACTACTC AATTGGGAAA CTAACTAACT TTATTCAACG CCTTGACAAG
TGGTTGAGGG TCCGAATAAG GCAGTATATT TGGAAGCAAT GGAAAAAGTT TAAAACTAAG
GTAACTAACT TACAGAAGTT GGGGCTGTCC CAGCATGATG CATATGTCTT CGCTAGTACC
CGAAAGGGCT ACTGGCGAAC TGCACATAGT AAGACCTTGA GCTATTCTCT AACTAATAGA
AAACTGGAAC AACTCGGACT TATGAATATG TCCAAGACGC TCCAATCAAT TTAA
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| Protein sequence | MRQSQKTEQQ ADRLSRIGLE NRKYTRARST GYGEGKGMSV TIQDLVLDRN NLNQAYLRVK
RNKGAAGVDD MTVNDLLPYL RENKTELIAS LREGKYKPAP VKRVEIPKPN GRVRRLGIPT
VVDRMVQQAV AQILTPIFER VFSDNSFGFR PHRGAHDAIE KVVDLYNQGY RRVADLDLKA
YFDNVNHDLM IKYLQQYIDD PWTLRLIRKF LTSGVLDHGL FAKSEKGTPQ GGPLSPLLAN
IYLNELDKEL TRRGHHFVRY ADDCNIYVKS QRAGERVMRS ITQFLEKRLK VKVNPDKTKV
GSPLRLKFLG FSLGVDHNGA YARPAKQSQQ RVKKALKLLT KRNRGISLTR MFEEIHRKMR
GWLQYYSIGK LTNFIQRLDK WLRVRIRQYI WKQWKKFKTK VTNLQKLGLS QHDAYVFAST
RKGYWRTAHS KTLSYSLTNR KLEQLGLMNM SKTLQSI
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